Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC109327.2-201ENST00000448339 378 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 snoU13.23-201ENST00000458863 104 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 AC067747.1-201ENST00000608026 250 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CHFRQ96EP1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHFRQ96EP1 SNORD114-1-201ENST00000362705 72 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 SNORD31B-201ENST00000364977 69 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 Y_RNA.344-201ENST00000365381 112 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 Y_RNA.666-201ENST00000516187 112 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNA5SP395-201ENST00000516567 118 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNY4P20-201ENST00000516678 93 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNU7-193P-201ENST00000516723 65 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNU7-172P-201ENST00000517125 64 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 AC026421.1-201ENST00000519101 163 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.38□□□□□ -2.03
CHFRQ96EP1 MIR5739-201ENST00000619803 80 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 AC015726.2-201ENST00000620112 122 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
CHFRQ96EP1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
CHFRQ96EP1 RNU6-228P-201ENST00000362700 106 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RNY4P6-201ENST00000363667 96 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 SNORD24-201ENST00000383884 75 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 MIR1294-201ENST00000408503 142 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RNA5SP225-201ENST00000410874 135 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RNU6-498P-201ENST00000459468 107 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 RPS26P48-201ENST00000491713 339 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 MIR4438-201ENST00000585271 93 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 AC090517.3-201ENST00000625170 141 ntBASIC2.37□□□□□ -2.03
CHFRQ96EP1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
CHFRQ96EP1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.37□□□□□ -2.03
CHFRQ96EP1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHFRQ96EP1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHFRQ96EP1 MIR302B-201ENST00000362188 73 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 RNU6-414P-201ENST00000363705 104 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CHFRQ96EP1 Y_RNA.593-201ENST00000410292 98 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 AL591806.2-201ENST00000433122 173 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 PGBD4P5-201ENST00000445958 426 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC107297.1-201ENST00000459991 176 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC141557.1-201ENST00000540982 400 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.36□□□□□ -2.03
CHFRQ96EP1 JPX_2.1-201ENST00000614161 69 ntBASIC2.36□□□□□ -2.03
CHFRQ96EP1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHFRQ96EP1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHFRQ96EP1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
CHFRQ96EP1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CHFRQ96EP1 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNU6-1104P-201ENST00000384723 104 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 MIR518F-201ENST00000384973 87 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 AC008134.1-201ENST00000420943 193 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RPS15AP28-201ENST00000435088 386 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNA5SP57-201ENST00000459463 123 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNU6-693P-201ENST00000516134 107 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 AC084364.2-201ENST00000546924 395 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
CHFRQ96EP1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CHFRQ96EP1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CHFRQ96EP1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CHFRQ96EP1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.03
CHFRQ96EP1 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 RNU6-349P-201ENST00000362402 107 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 RNU1-72P-201ENST00000362976 153 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 RNU6-972P-201ENST00000391208 107 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 AL023284.1-201ENST00000403956 276 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 RNU6-893P-201ENST00000458841 100 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 AC015712.3-201ENST00000559380 164 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 MIR4529-201ENST00000578110 78 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 MIR5197-201ENST00000583721 112 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 AC008507.4-201ENST00000585464 127 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CHFRQ96EP1 MIR2052-201ENST00000636055 55 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
CHFRQ96EP1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CHFRQ96EP1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHFRQ96EP1 Y_RNA.93-201ENST00000363066 109 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 Y_RNA.107-201ENST00000363190 121 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 Y_RNA.213-201ENST00000364178 111 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 RNU6-1134P-201ENST00000365156 101 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 RNU6-1124P-201ENST00000384169 107 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
CHFRQ96EP1 FAM71BP1-201ENST00000604431 523 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 325.9 ms