Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 AC114811.1-201ENST00000507207 168 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 RNU6-453P-201ENST00000516819 85 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 MIR4744-201ENST00000581563 82 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 AC008507.4-201ENST00000585464 127 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 SNORD50B-201ENST00000364995 70 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 MT-TT-201ENST00000387460 66 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 RNU6-918P-201ENST00000391219 106 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 SCARNA8-201ENST00000515924 131 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 RNU6-126P-201ENST00000516685 103 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 RNU7-149P-201ENST00000516739 59 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 SNORA81.3-201ENST00000517283 198 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 AP002392.1-201ENST00000537692 208 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 MIR4778-201ENST00000577635 80 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 MIR4662B-201ENST00000579498 81 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 AC095038.3-201ENST00000634439 195 ntBASIC1.86□□□□□ -2.11
TRIM43Q96BQ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.182-201ENST00000363880 111 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 RNU6-47P-201ENST00000383866 107 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 RNU6-442P-201ENST00000383968 104 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 MIR194-1-201ENST00000384892 85 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 SNORD77.4-201ENST00000516158 81 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 Pinc.1-201ENST00000616452 154 ntBASIC1.85□□□□□ -2.11
TRIM43Q96BQ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 RNU6-728P-201ENST00000365375 104 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 AL161935.2-201ENST00000414627 60 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 RNU6-182P-201ENST00000516970 105 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 SUMO2P16-201ENST00000519475 264 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 AC072026.1-201ENST00000605023 201 ntBASIC1.84□□□□□ -2.11
TRIM43Q96BQ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.12
TRIM43Q96BQ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNU6-578P-201ENST00000390980 103 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 SNORD72-201ENST00000390994 80 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNU2-55P-201ENST00000411146 174 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 AL121914.1-201ENST00000450188 156 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 AC093850.1-201ENST00000454121 251 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 SNORA77B-201ENST00000578179 125 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 MIR4452-201ENST00000583004 71 ntBASIC1.83□□□□□ -2.12
TRIM43Q96BQ3 RNU6-199P-201ENST00000362954 107 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 MIR452-201ENST00000385020 85 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 SNORA26-201ENST00000391286 122 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 AC109810.1-201ENST00000534066 224 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 MIR8063-201ENST00000621930 81 ntBASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRIM43Q96BQ3 RN7SKP51-201ENST00000410781 304 ntBASIC1.81□□□□□ -2.12
TRIM43Q96BQ3 RNA5SP102-201ENST00000516865 106 ntBASIC1.81□□□□□ -2.12
TRIM43Q96BQ3 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
TRIM43Q96BQ3 AC108706.1-201ENST00000611053 297 ntBASIC1.81□□□□□ -2.12
TRIM43Q96BQ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 SNORD38C-201ENST00000384381 69 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 MIR15B-201ENST00000385045 98 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 RNU2-70P-201ENST00000410718 179 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 RNU1-123P-201ENST00000458950 160 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 RNU7-120P-201ENST00000459334 63 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 AC022559.1-201ENST00000520905 205 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 AC004792.1-201ENST00000614523 137 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 RMST_2.1-201ENST00000617263 136 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 AC106754.2-201ENST00000623006 233 ntBASIC1.8□□□□□ -2.12
TRIM43Q96BQ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms