Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU6-163P-201ENST00000384396 106 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 SNORA11.2-201ENST00000408318 127 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 MIR3945-201ENST00000581853 98 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CCHCR1Q8TD31 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 SNORD50.2-201ENST00000365465 70 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 SNORD61-201ENST00000384252 73 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 MIR548A2-201ENST00000384956 97 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 SNRPGP13-201ENST00000442212 177 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 RNA5SP57-201ENST00000459463 123 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 Y_RNA.666-201ENST00000516187 112 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 AC007751.1-201ENST00000529260 376 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 MIR6844-201ENST00000637122 62 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CCHCR1Q8TD31 RNU4-11P-201ENST00000365287 132 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 MIR194-1-201ENST00000384892 85 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 MIR802-201ENST00000390235 94 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 SNORA75.5-201ENST00000391291 81 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 AL365205.2-201ENST00000594586 68 ntBASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.01□□□□□ -2.09
CCHCR1Q8TD31 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCHCR1Q8TD31 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 SNORA25.7-201ENST00000364375 127 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 MIR660-201ENST00000385235 97 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 RNU7-12P-201ENST00000516030 62 ntBASIC2□□□□□ -2.09
CCHCR1Q8TD31 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2□□□□□ -2.09
CCHCR1Q8TD31 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCHCR1Q8TD31 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2□□□□□ -2.09
CCHCR1Q8TD31 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 RNU6-1082P-201ENST00000364574 107 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 Y_RNA.488-201ENST00000384403 102 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 Y_RNA.542-201ENST00000384641 111 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 MIR518F-201ENST00000384973 87 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 MIR569-201ENST00000385228 96 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 MIR613-201ENST00000385248 95 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 RNU7-197P-201ENST00000458836 62 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 AC090142.3-201ENST00000519012 385 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 AC112693.2-201ENST00000556538 232 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 MIR548X2-201ENST00000579776 100 ntBASIC1.99□□□□□ -2.09
CCHCR1Q8TD31 SNORD37.2-201ENST00000391075 66 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 MIR548O-201ENST00000408583 114 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 RNU6-588P-201ENST00000410281 105 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 AL161935.2-201ENST00000414627 60 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 RNU6-693P-201ENST00000516134 107 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 MIR4713-201ENST00000582691 75 ntBASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
CCHCR1Q8TD31 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-1123P-201ENST00000362347 106 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-199P-201ENST00000362954 107 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-704P-201ENST00000364162 103 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-1292P-201ENST00000383856 107 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 SNORA1-201ENST00000384107 130 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 Y_RNA.568-201ENST00000384742 113 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-830P-201ENST00000516353 107 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU7-25P-201ENST00000516544 62 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 RNU6-1270P-201ENST00000517128 108 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
CCHCR1Q8TD31 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
CCHCR1Q8TD31 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 SNORD114-1-201ENST00000362705 72 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.251-201ENST00000364551 99 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.343-201ENST00000365354 112 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 RNU6-1336P-201ENST00000383886 109 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 Y_RNA.547-201ENST00000384654 119 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 MIR624-201ENST00000385217 97 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 MIR513C-201ENST00000401352 84 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 RNU4-61P-201ENST00000411243 107 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 AC015922.2-201ENST00000435593 184 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 AC092991.1-201ENST00000477176 376 ntBASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCHCR1Q8TD31 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 RNY1P11-201ENST00000363759 113 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 AC093850.1-201ENST00000454121 251 ntBASIC1.95□□□□□ -2.1
CCHCR1Q8TD31 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms