Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RN7SL442P-201ENST00000473804 320 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 UBL5P1-201ENST00000507979 193 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 AC024995.1-201ENST00000523014 93 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 MIR6841-201ENST00000637129 72 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 AC073325.2-201ENST00000339545 159 ntBASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 RNU6-129P-201ENST00000391022 107 ntBASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 HMGN1P18-201ENST00000457642 277 ntBASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 GTF3AP2-201ENST00000557014 266 ntBASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NKX2-3Q8TAU0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 RNU7-28P-201ENST00000516759 62 ntBASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 AC090821.2-201ENST00000523552 176 ntBASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 MIR7157-201ENST00000635801 60 ntBASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-3Q8TAU0 SNORA22.1-201ENST00000362701 134 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 Y_RNA.494-201ENST00000384432 111 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 RNU6-613P-201ENST00000410412 108 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 IGLV3-17-201ENST00000519099 244 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-3Q8TAU0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 SNORD56.3-201ENST00000363507 71 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 SNORA8-201ENST00000384574 139 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 RNA5SP261-201ENST00000410536 106 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 UBL5P3-201ENST00000475112 231 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 SEM1P1-201ENST00000506694 209 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 RNU7-2P-201ENST00000516096 62 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 SEPT14P17-201ENST00000617978 177 ntBASIC3.67□□□□□ -1.82
NKX2-3Q8TAU0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 Y_RNA.567-201ENST00000384736 106 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RNA5SP323-201ENST00000391094 133 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RNU1-101P-201ENST00000391171 127 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RN7SL20P-201ENST00000488827 297 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 AC114811.1-201ENST00000507207 168 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 AC007318.2-201ENST00000620999 243 ntBASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-3Q8TAU0 RNU4-82P-201ENST00000362443 140 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 SNORA71.1-201ENST00000364523 117 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 RNU6-424P-201ENST00000384367 105 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 RNU2-63P-201ENST00000410792 194 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 AC006539.3-201ENST00000454258 129 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 RNU7-45P-201ENST00000459460 63 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 AC073476.4-201ENST00000628409 72 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-3Q8TAU0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 RNA5SP184-201ENST00000411071 108 ntBASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX2-3Q8TAU0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 RNU6-624P-201ENST00000363411 107 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 RNU6-478P-201ENST00000363904 110 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 Y_RNA.340-201ENST00000365330 92 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 CD24P4-201ENST00000382840 243 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 MIR95-201ENST00000385072 81 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 MIR1267-201ENST00000408723 78 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 AC022018.1-201ENST00000430685 241 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 AL163195.1-201ENST00000496941 348 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 RNU6-871P-201ENST00000516122 100 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 RNU6-991P-201ENST00000516168 107 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 AC103810.6-201ENST00000606708 136 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 MIR622-201ENST00000638396 96 ntBASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-3Q8TAU0 Y_RNA.57-201ENST00000362806 113 ntBASIC3.62□□□□□ -1.83
NKX2-3Q8TAU0 SNORA25.6-201ENST00000364121 118 ntBASIC3.62□□□□□ -1.83
NKX2-3Q8TAU0 SNORA26.6-201ENST00000391256 115 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms