Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 MIR9-3-201ENST00000385084 90 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 RNU4-43P-201ENST00000410628 137 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 AC107027.2-201ENST00000512197 115 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 AL359851.1-201ENST00000569460 4997 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 SNORD14E-201ENST00000364009 85 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 RNU6-643P-201ENST00000384018 107 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 RNU6-360P-201ENST00000390944 104 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 RNU2-70P-201ENST00000410718 179 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 AC009474.2-201ENST00000451383 136 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 SNRPGP8-201ENST00000454064 226 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 RNU6-561P-201ENST00000516222 102 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 AC008507.4-201ENST00000585464 127 ntBASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.25□□□□□ -2.05
SMC1BQ8NDV3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 CYCTP-201ENST00000504253 315 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 RNA5SP153-201ENST00000516498 76 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 MIR4255-201ENST00000579351 72 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 MIR5089-201ENST00000580047 84 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 AC120024.3-201ENST00000603167 156 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 AL773524.1-201ENST00000614065 229 ntBASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC1BQ8NDV3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU6-163P-201ENST00000384396 106 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU2-40P-201ENST00000410833 196 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 AC006461.1-201ENST00000412637 326 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 HMGN2P32-201ENST00000444648 269 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU1-123P-201ENST00000458950 160 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 MRPS17P9-201ENST00000511924 393 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU6-197P-201ENST00000516680 100 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNA5SP102-201ENST00000516865 106 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 AL160236.1-201ENST00000556317 195 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 MIR502-201ENST00000606349 86 ntBASIC2.23□□□□□ -2.05
SMC1BQ8NDV3 RNU4-84P-201ENST00000364200 139 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 RNU6-442P-201ENST00000383968 104 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 RNU6-484P-201ENST00000384016 107 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 RNU6-239P-201ENST00000390990 99 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 SNORD45.4-201ENST00000516629 73 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 AC027279.3-201ENST00000625055 122 ntBASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
SMC1BQ8NDV3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 SNORD50B-201ENST00000364995 70 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 SNORD72-201ENST00000390994 80 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 CALM2P4-201ENST00000430810 426 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 RNA5SP168-201ENST00000516642 112 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 RNU6-365P-201ENST00000517113 106 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 AC104465.1-201ENST00000611365 139 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 AL513423.1-201ENST00000621695 132 ntBASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.21□□□□□ -2.06
SMC1BQ8NDV3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 RNU6-424P-201ENST00000384367 105 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 U8.16-201ENST00000391279 133 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 AC114811.1-201ENST00000507207 168 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 RNU7-12P-201ENST00000516030 62 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.36-201ENST00000362602 112 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 RNU6-414P-201ENST00000363705 104 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 MIR891A-201ENST00000401237 79 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 RNU6-394P-201ENST00000410735 107 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 PGBD4P5-201ENST00000445958 426 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 MIR3144-201ENST00000579460 79 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 AC022709.1-201ENST00000615967 87 ntBASIC2.19□□□□□ -2.06
SMC1BQ8NDV3 MIR6515-201ENST00000619843 57 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms