Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF135Q8IUD6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC062016.1-201ENST00000355719 319 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 RNU6-832P-201ENST00000363319 107 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.351-201ENST00000365436 96 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 RNU6-979P-201ENST00000383896 107 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 MIR577-201ENST00000385196 96 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC105272.1-201ENST00000438604 198 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 RNU7-80P-201ENST00000459562 61 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 MIR4778-201ENST00000577635 80 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 MIR3618-201ENST00000580330 88 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 MIR5588-201ENST00000581890 63 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 MIR548Z-201ENST00000584743 97 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 HSPE1P19-201ENST00000603327 295 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC069114.2-201ENST00000604699 304 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 uc_338.25-201ENST00000613756 156 ntBASIC3.27□□□□□ -1.89
RNF135Q8IUD6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF135Q8IUD6 AC093010.3-201ENST00000570269 15214 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.155-201ENST00000363632 101 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNU4-16P-201ENST00000364737 141 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 SNORD38C-201ENST00000384381 69 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNU6-163P-201ENST00000384396 106 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNU6-402P-201ENST00000410678 103 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 UBL5P3-201ENST00000475112 231 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 RNU6-857P-201ENST00000515893 110 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 AC002984.1-201ENST00000591692 448 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 MIR7843-201ENST00000622274 79 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 AC091932.4-201ENST00000623386 200 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 MIR1255B1-201ENST00000636325 63 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
RNF135Q8IUD6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF135Q8IUD6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF135Q8IUD6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF135Q8IUD6 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 RNU6-1019P-201ENST00000364424 107 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.360-201ENST00000365512 102 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.454-201ENST00000384224 113 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 BTF3P4-201ENST00000418852 495 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 RNA5SP385-201ENST00000515947 110 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 RNU6-1116P-201ENST00000517269 99 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF135Q8IUD6 MIR4666B-201ENST00000578142 81 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.25□□□□□ -1.89
RNF135Q8IUD6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF135Q8IUD6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF135Q8IUD6 RNU6-661P-201ENST00000362409 107 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 RNU6-363P-201ENST00000362895 105 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 SNORD115-19-201ENST00000363098 82 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 SNORD115-18-201ENST00000363293 82 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 SNORD115-17-201ENST00000364612 82 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.313-201ENST00000365095 103 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 AL627390.1-201ENST00000396055 340 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 RNU6-733P-201ENST00000410759 104 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 MRPL35P3-201ENST00000421557 364 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.773-201ENST00000607168 90 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 MIR203B-201ENST00000636080 86 ntBASIC3.24□□□□□ -1.89
RNF135Q8IUD6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF135Q8IUD6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF135Q8IUD6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF135Q8IUD6 MIRLET7C-201ENST00000362160 84 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.437-201ENST00000384113 113 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 RNU6-409P-201ENST00000384114 104 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 SNORD116-22-201ENST00000384430 92 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 SNORD15B-201ENST00000384714 146 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 RNU6-267P-201ENST00000516714 103 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 MIR4769-201ENST00000584126 77 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 AC027279.3-201ENST00000625055 122 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF135Q8IUD6 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
RNF135Q8IUD6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RNF135Q8IUD6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF135Q8IUD6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 SNORD115-13-201ENST00000363358 82 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 SNORD115-16-201ENST00000363887 82 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 Y_RNA.190-201ENST00000363964 101 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 RNU4-67P-201ENST00000364569 141 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 RNU6-60P-201ENST00000364792 103 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 SNORD115-1-201ENST00000364961 82 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 MIR605-201ENST00000385078 83 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 BX510359.4-201ENST00000423750 193 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 AC069257.2-201ENST00000441819 155 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 RNU7-171P-201ENST00000459581 62 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 RPS23P4-201ENST00000487908 423 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 SNORA31.10-201ENST00000516482 106 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF135Q8IUD6 MIR4777-201ENST00000583710 86 ntBASIC3.22□□□□□ -1.89
RNF135Q8IUD6 AL513534.2-201ENST00000603836 250 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms