Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 AC095038.3-201ENST00000634439 195 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 MIR449A-201ENST00000362113 91 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-888P-201ENST00000363010 101 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 Y_RNA.215-201ENST00000364204 112 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 SNORA25.7-201ENST00000364375 127 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-1082P-201ENST00000364574 107 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-588P-201ENST00000410281 105 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RN7SKP192-201ENST00000411291 327 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 RNU7-25P-201ENST00000516544 62 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 MIR1273D-201ENST00000577266 86 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 MIR3646-201ENST00000578301 84 ntBASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PTCHD4Q6ZW05 SNORA1-201ENST00000384107 130 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 MIR518F-201ENST00000384973 87 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 SNORA75.5-201ENST00000391291 81 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 AC015922.2-201ENST00000435593 184 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 AC112693.2-201ENST00000556538 232 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 AC015726.2-201ENST00000620112 122 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 SCARNA15.3-201ENST00000626315 122 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 SCARNA4.1-201ENST00000628597 123 ntBASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-1123P-201ENST00000362347 106 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 SNORD38C-201ENST00000384381 69 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 Y_RNA.488-201ENST00000384403 102 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 Y_RNA.547-201ENST00000384654 119 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 SNORA3.2-201ENST00000408221 125 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 RN7SKP223-201ENST00000410582 62 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 SNORA25.12-201ENST00000516202 82 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 MIR548X2-201ENST00000579776 100 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 MIR3129-201ENST00000581095 76 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 AL365205.2-201ENST00000594586 68 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 MIR219B-201ENST00000637023 88 ntBASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTCHD4Q6ZW05 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-661P-201ENST00000362409 107 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 RNY1P11-201ENST00000363759 113 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 MIR516B2-201ENST00000385190 85 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 MIR513C-201ENST00000401352 84 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 JTBP1-201ENST00000441314 247 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 MIR6852-201ENST00000621699 66 ntBASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.74□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-457P-201ENST00000363999 107 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 Y_RNA.542-201ENST00000384641 111 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 MIR526A1-201ENST00000384897 85 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 MIR452-201ENST00000385020 85 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 MIR634-201ENST00000385208 97 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 MIR569-201ENST00000385228 96 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AL161935.2-201ENST00000414627 60 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AF228730.3-201ENST00000436691 102 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 RNA5SP272-201ENST00000516095 111 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 SNORA18.4-201ENST00000516440 124 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AL590808.1-201ENST00000618696 141 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 AC106754.2-201ENST00000623006 233 ntBASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTCHD4Q6ZW05 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 SNORD115-28-201ENST00000363931 81 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 Y_RNA.343-201ENST00000365354 112 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 RNA5SP425-201ENST00000410336 112 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 AC092991.1-201ENST00000477176 376 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 RNU6-426P-201ENST00000516464 97 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 DEFB122-202ENST00000569013 197 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.72□□□□□ -2.13
PTCHD4Q6ZW05 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 SNORD77.3-201ENST00000391113 65 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 RNA5SP127-201ENST00000411051 133 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 RNU4-61P-201ENST00000411243 107 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 RNU7-197P-201ENST00000458836 62 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 MIR8074-201ENST00000615081 81 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 AC134878.1-201ENST00000619901 243 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 AC064859.1-201ENST00000624741 174 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 AL442644.1-201ENST00000454390 3105 ntBASIC1.71□□□□□ -2.14
PTCHD4Q6ZW05 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms