Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU6-1046P-201ENST00000516538 107 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.85□□□□□ -2.27
RPUSD3Q6P087 C8orf59P2-201ENST00000603441 271 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 AC015726.2-201ENST00000620112 122 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.14-201ENST00000362415 103 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 SNORD114-26-201ENST00000363543 72 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 RNU6-514P-201ENST00000384208 107 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 SNORD115-46-201ENST00000390982 71 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 SNORA53-201ENST00000391141 249 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 MIR1252-201ENST00000408861 65 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.602-201ENST00000410535 92 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 SNORD11-201ENST00000459124 84 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 AC113410.1-201ENST00000505029 247 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 AL117351.2-201ENST00000513571 157 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 SNORA40.15-201ENST00000516884 107 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
RPUSD3Q6P087 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
RPUSD3Q6P087 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6-1048P-201ENST00000364054 107 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.389-201ENST00000383924 113 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RPUSD3Q6P087 SNORD28B-201ENST00000390993 75 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6-613P-201ENST00000410412 108 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 MTND4LP11-201ENST00000422184 280 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 AC098869.1-201ENST00000481627 292 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6-496P-201ENST00000516145 99 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6-397P-201ENST00000516226 104 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 RNU6-764P-201ENST00000516396 105 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 AC104465.1-201ENST00000611365 139 ntBASIC0.83□□□□□ -2.28
RPUSD3Q6P087 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.28-201ENST00000362554 111 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.460-201ENST00000384255 102 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 MIR7-2-201ENST00000384970 110 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 RNU6-823P-201ENST00000391042 103 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 SNORA26.5-201ENST00000391215 123 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 RNU2-14P-201ENST00000411053 191 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.82□□□□□ -2.28
RPUSD3Q6P087 MTATP6P23-201ENST00000440153 476 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 RNU6-126P-201ENST00000516685 103 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 RNU6-897P-201ENST00000517135 105 ntBASIC0.82□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.376-201ENST00000365638 108 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 MIR1278-201ENST00000408753 81 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.81□□□□□ -2.28
RPUSD3Q6P087 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.81□□□□□ -2.28
RPUSD3Q6P087 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.631-201ENST00000459607 101 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 AC010655.3-201ENST00000478818 450 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 RNU6-1143P-201ENST00000516125 104 ntBASIC0.81□□□□□ -2.28
RPUSD3Q6P087 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.81□□□□□ -2.28
RPUSD3Q6P087 MIR367-201ENST00000362299 68 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.152-201ENST00000363578 100 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 RNU6-290P-201ENST00000365212 101 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.418-201ENST00000384029 102 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 SNORD72-201ENST00000390994 80 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.581-201ENST00000391017 97 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 HSPE1P25-201ENST00000455484 251 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.8□□□□□ -2.28
RPUSD3Q6P087 MIR4662B-201ENST00000579498 81 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 MIR4791-201ENST00000607666 84 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 AC013791.1-201ENST00000616619 62 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 7SK.10-201ENST00000621414 298 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 AL160413.1-201ENST00000622780 310 ntBASIC0.8□□□□□ -2.28
RPUSD3Q6P087 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
RPUSD3Q6P087 MIR1-1-201ENST00000362147 71 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 SNORA25.1-201ENST00000362326 128 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.128-201ENST00000363391 112 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 RNU1-133P-201ENST00000364867 167 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
RPUSD3Q6P087 RNU6-763P-201ENST00000390865 106 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 RNU6-308P-201ENST00000390957 107 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 AL035398.1-201ENST00000430869 322 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 RNU2-31P-201ENST00000516954 155 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 RNU7-181P-201ENST00000517234 74 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 AP000753.3-201ENST00000604083 169 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 uc_338.4-201ENST00000616635 176 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 MIR6516-201ENST00000630554 81 ntBASIC0.79□□□□□ -2.28
RPUSD3Q6P087 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.168-201ENST00000363740 102 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 RNU6-326P-201ENST00000365480 107 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.419-201ENST00000384041 102 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 MT-TN-201ENST00000387400 73 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.645-201ENST00000391229 102 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 AL603910.2-201ENST00000407268 136 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 MTCO1P5-201ENST00000433573 344 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 MRPS35P2-201ENST00000508242 191 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.78□□□□□ -2.28
RPUSD3Q6P087 MIR4724-201ENST00000579485 89 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 MIR5688-201ENST00000580619 83 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 RAC1P9-201ENST00000604990 392 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.78□□□□□ -2.28
RPUSD3Q6P087 Y_RNA.36-201ENST00000362602 112 ntBASIC0.77□□□□□ -2.29
RPUSD3Q6P087 Y_RNA.813-201ENST00000364639 102 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms