Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR5197-201ENST00000583721 112 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 SNORA64-201ENST00000384674 134 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.649-201ENST00000459077 103 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 CYCTP-201ENST00000504253 315 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 RNA5SP458-201ENST00000516188 119 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-113P-201ENST00000516653 101 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 AC007336.1-201ENST00000576365 3828 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 SNORA28-201ENST00000606769 126 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 AC006441.5-201ENST00000612680 209 ntBASIC2.89□□□□□ -1.95
PRPF40BQ6NWY9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 MIR6073-201ENST00000352083 89 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-1189P-201ENST00000383958 107 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 SNORA80E-201ENST00000384744 137 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 RNA5SP181-201ENST00000410246 98 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 BX510359.4-201ENST00000423750 193 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 AC069257.2-201ENST00000441819 155 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 MIR5094-201ENST00000578766 85 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 AC015726.2-201ENST00000620112 122 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF40BQ6NWY9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 SNORD115-28-201ENST00000363931 81 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-268P-201ENST00000364174 107 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 SNORA2.2-201ENST00000365473 135 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-163P-201ENST00000384396 106 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-880P-201ENST00000384526 107 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 MIR5007-201ENST00000583098 95 ntBASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF40BQ6NWY9 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 MIR548A1-201ENST00000385041 97 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-440P-201ENST00000390882 105 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 AL445646.1-201ENST00000431784 216 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 MIR8054-201ENST00000620877 86 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 AC022513.1-201ENST00000624512 117 ntBASIC2.86□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.35-201ENST00000362601 101 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 MIR597-201ENST00000384968 97 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 RNU11-3P-201ENST00000391111 133 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 SCARNA15-202ENST00000516881 127 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 AC084364.2-201ENST00000546924 395 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 AC067747.1-201ENST00000608026 250 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 AL137067.1-201ENST00000615933 120 ntBASIC2.85□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.37-201ENST00000362606 108 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 SNORD38C-201ENST00000384381 69 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.528-201ENST00000384575 108 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 MIRLET7F2-201ENST00000385277 83 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 SNORA31.15-201ENST00000516771 132 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 MIR4658-201ENST00000584344 65 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 AL137847.3-201ENST00000611521 109 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 MIR376A2-201ENST00000636782 80 ntBASIC2.84□□□□□ -1.95
PRPF40BQ6NWY9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 SNORA67.3-201ENST00000384366 140 ntBASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 SNORA18.7-201ENST00000516910 131 ntBASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 IGKV1-22-201ENST00000524313 326 ntBASIC2.83□□□□□ -1.96
PRPF40BQ6NWY9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-755P-201ENST00000364400 103 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-690P-201ENST00000365242 106 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 Y_RNA.366-201ENST00000365540 102 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-950P-201ENST00000384651 107 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RN7SKP200-201ENST00000410564 320 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RNA5SP136-201ENST00000410906 107 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 AC063976.4-201ENST00000421971 163 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RPL23AP42-201ENST00000471152 471 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 AC114811.1-201ENST00000507207 168 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-240P-201ENST00000516098 97 ntBASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF40BQ6NWY9 AC092881.1-201ENST00000638218 2733 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 AL034345.1-201ENST00000407768 123 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 SNRPGP14-201ENST00000435400 219 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 SNORD36C-201ENST00000516733 66 ntBASIC2.81□□□□□ -1.96
PRPF40BQ6NWY9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 MIR221-201ENST00000385135 110 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 RNA5SP465-201ENST00000391195 109 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 AL023284.1-201ENST00000403956 276 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 CALM2P4-201ENST00000430810 426 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms