Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-918P-201ENST00000391219 106 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 SNORA79-201ENST00000408376 140 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 AL138752.1-201ENST00000452964 351 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 RNU6-504P-201ENST00000516568 104 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 SNORA74.3-201ENST00000517108 154 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 AL160236.1-201ENST00000556317 195 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 MIR3945-201ENST00000581853 98 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 AC104984.5-201ENST00000586878 94 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 AC015726.2-201ENST00000620112 122 ntBASIC1.68□□□□□ -2.14
RNF220Q5VTB9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 SNRPGP13-201ENST00000442212 177 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 AL121914.1-201ENST00000450188 156 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 AC109810.1-201ENST00000534066 224 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 AC108706.1-201ENST00000611053 297 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
RNF220Q5VTB9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RNF220Q5VTB9 SNORD24-201ENST00000383884 75 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RNF220Q5VTB9 MIR548O-201ENST00000408583 114 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6-138P-201ENST00000515952 107 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6-561P-201ENST00000516222 102 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6-197P-201ENST00000516680 100 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 MIR3124-201ENST00000582636 67 ntBASIC1.66□□□□□ -2.14
RNF220Q5VTB9 RNU6-47P-201ENST00000383866 107 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 RNU4-43P-201ENST00000410628 137 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 SNORD123-201ENST00000459473 70 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 RNU6-693P-201ENST00000516134 107 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 RNU7-25P-201ENST00000516544 62 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
RNF220Q5VTB9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RNF220Q5VTB9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RNF220Q5VTB9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.64□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 U8.17-201ENST00000391292 132 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
RNF220Q5VTB9 RPL39P39-201ENST00000455840 151 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 MIR3671-201ENST00000580455 88 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 AC097639.2-201ENST00000603159 172 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 RNU6-888P-201ENST00000363010 101 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 RNU6-275P-201ENST00000364910 107 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 SNORD61-201ENST00000384252 73 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 MIR520C-201ENST00000385005 87 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 AC003989.2-201ENST00000440224 169 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.63□□□□□ -2.15
RNF220Q5VTB9 RNU6-947P-201ENST00000516264 106 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 RNU7-43P-201ENST00000516554 64 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 RN7SKP88-201ENST00000516847 250 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 7SK.8-201ENST00000612110 250 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 7SK.11-201ENST00000615477 250 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 7SK.13-201ENST00000622040 250 ntBASIC1.63□□□□□ -2.15
RNF220Q5VTB9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
RNF220Q5VTB9 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 SNORA1.2-201ENST00000365189 134 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 RNU4-57P-201ENST00000515980 135 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 AP002392.1-201ENST00000537692 208 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 CYP3A52P-201ENST00000563326 91 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 MIR4764-201ENST00000580680 88 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 AC072026.1-201ENST00000605023 201 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 AC090425.1-201ENST00000610007 140 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 U6.106-201ENST00000636360 105 ntBASIC1.62□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 SNORD115-28-201ENST00000363931 81 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.61□□□□□ -2.15
RNF220Q5VTB9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.61□□□□□ -2.15
RNF220Q5VTB9 SNORD111.1-201ENST00000516421 86 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 RNU6-794P-201ENST00000517261 64 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.61□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 MIR518F-201ENST00000384973 87 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 AC087499.4-201ENST00000448505 178 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 snoU13.26-201ENST00000459452 105 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 RNU1-41P-201ENST00000516161 162 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 RNU1-48P-201ENST00000516400 162 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 352.5 ms