Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 RNU1-51P-201ENST00000365345 176 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 RNU7-67P-201ENST00000459003 62 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 snoU13.27-201ENST00000459278 104 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 AC021506.2-201ENST00000612354 169 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 U1.36-201ENST00000620684 176 ntBASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM259Q4ZIN3 RNU6-296P-201ENST00000384608 107 ntBASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 RNA5SP144-201ENST00000410846 116 ntBASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 RNU6-958P-201ENST00000516995 106 ntBASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 SNORD3E-202ENST00000627253 216 ntBASIC3.18□□□□□ -1.9
TMEM259Q4ZIN3 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 SNORA70.7-201ENST00000384159 133 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 RN7SKP192-201ENST00000411291 327 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 RNU6-592P-201ENST00000411333 103 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 RNU7-45P-201ENST00000459460 63 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 SCARNA13-201ENST00000516672 275 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 SNORD14A-201ENST00000606526 91 ntBASIC3.17□□□□□ -1.9
TMEM259Q4ZIN3 MIR422A-201ENST00000362286 90 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 AL512326.2-201ENST00000426359 151 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 SNORA40.13-201ENST00000516379 120 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 AL513423.1-201ENST00000621695 132 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 MIR1245B-201ENST00000636115 69 ntBASIC3.16□□□□□ -1.9
TMEM259Q4ZIN3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM259Q4ZIN3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM259Q4ZIN3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
TMEM259Q4ZIN3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 MIR660-201ENST00000385235 97 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 AL135938.1-201ENST00000443141 297 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 PGBD4P5-201ENST00000445958 426 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 RPL39P25-201ENST00000449384 154 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 SNORA31.4-201ENST00000516049 129 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 AC004812.1-201ENST00000540773 146 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 MIR3152-201ENST00000579801 74 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 AC092881.1-201ENST00000638218 2733 ntBASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM259Q4ZIN3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 Y_RNA.558-201ENST00000384685 113 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 AC008885.1-201ENST00000514930 301 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 RNU7-53P-201ENST00000516705 60 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 AL442644.1-201ENST00000454390 3105 ntBASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TMEM259Q4ZIN3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 Y_RNA.544-201ENST00000384650 113 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 RNA5SP492-201ENST00000411330 114 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 AC141557.1-201ENST00000540982 400 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 AL162726.3-218ENST00000636401 95 ntBASIC3.13□□□□□ -1.91
TMEM259Q4ZIN3 RPS29P29-201ENST00000456396 171 ntBASIC3.12□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-893P-201ENST00000458841 100 ntBASIC3.12□□□□□ -1.91
TMEM259Q4ZIN3 SNORD123-201ENST00000459473 70 ntBASIC3.12□□□□□ -1.91
TMEM259Q4ZIN3 MIR548AR-201ENST00000582191 57 ntBASIC3.12□□□□□ -1.91
TMEM259Q4ZIN3 AL513534.2-201ENST00000603836 250 ntBASIC3.12□□□□□ -1.91
TMEM259Q4ZIN3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-816P-201ENST00000390914 107 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-1268P-201ENST00000391214 107 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-1239P-201ENST00000391310 107 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RPS3AP1-201ENST00000413190 320 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RNU7-113P-201ENST00000459273 62 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-970P-201ENST00000516312 107 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 EIF4BP1-201ENST00000554881 351 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 AL442128.1-201ENST00000615151 90 ntBASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TMEM259Q4ZIN3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-1067P-201ENST00000384752 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms