Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 MIR340-201ENST00000362125 95 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 RNA5SP432-201ENST00000362480 116 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 MIR548G-201ENST00000408442 89 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 AC123900.1-201ENST00000420390 96 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 AL357552.1-201ENST00000445254 415 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 CYP2C59P-201ENST00000457790 269 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 RNU6-991P-201ENST00000516168 107 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 AC007536.1-201ENST00000533382 349 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 uc_338.25-201ENST00000613756 156 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 MIR7515-201ENST00000637837 67 ntBASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CTC1Q2NKJ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 RNA5SP323-201ENST00000391094 133 ntBASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 AC008885.1-201ENST00000514930 301 ntBASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 RNU7-181P-201ENST00000517234 74 ntBASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CTC1Q2NKJ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-34-201ENST00000362441 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-12-201ENST00000362583 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-29-201ENST00000362834 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-9-201ENST00000362912 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-21-201ENST00000362963 81 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-14-201ENST00000363090 81 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-41-201ENST00000363608 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-11-201ENST00000363616 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-5-201ENST00000363633 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-4-201ENST00000363810 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-6-201ENST00000363942 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-42-201ENST00000364273 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-15-201ENST00000364809 81 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-26-201ENST00000365067 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-10-201ENST00000365073 81 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-43-201ENST00000365503 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORD115-36-201ENST00000365629 82 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORA8-201ENST00000384574 139 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 MIR181B2-201ENST00000385004 89 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 RNU6-519P-201ENST00000410590 108 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 RN7SKP192-201ENST00000411291 327 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SPINT5P-201ENST00000448174 155 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 RNU6-826P-201ENST00000516827 104 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 MIR3152-201ENST00000579801 74 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 MIR3199-1-201ENST00000582434 88 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 AC104984.5-201ENST00000586878 94 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 MIR338-201ENST00000636369 67 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 MIR6841-201ENST00000637129 72 ntBASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTC1Q2NKJ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 MIR148B-201ENST00000362252 99 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 SNORA7.4-201ENST00000384249 137 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 MIR206-201ENST00000384872 86 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 MIR218-1-201ENST00000384999 110 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 MIR1236-201ENST00000408340 102 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 UBL5P3-201ENST00000475112 231 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 RNU6-448P-201ENST00000517052 107 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 RNU6-90P-201ENST00000606352 106 ntBASIC3.44□□□□□ -1.86
CTC1Q2NKJ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 MAPK10-362ENST00000641864 4484 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 MIRLET7A1-201ENST00000362295 80 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 RNU6-624P-201ENST00000363411 107 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 RNU6-546P-201ENST00000383991 107 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 RNU6-649P-201ENST00000384463 107 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 TRBV12-1-201ENST00000479785 344 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 RNA5SP356-201ENST00000515972 94 ntBASIC3.43□□□□□ -1.86
CTC1Q2NKJ3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 FO393413.1-201ENST00000402892 195 ntBASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 RNU2-59P-201ENST00000410482 191 ntBASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 RNU6-1190P-201ENST00000410811 104 ntBASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
CTC1Q2NKJ3 AC087499.7-201ENST00000441958 109 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms