Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 Pinc.1-201ENST00000616452 154 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 MIR378A-201ENST00000362177 66 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 RNY1P11-201ENST00000363759 113 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 Y_RNA.251-201ENST00000364551 99 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 RNU6-1082P-201ENST00000364574 107 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 Y_RNA.420-201ENST00000384043 110 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 RNU6-1117P-201ENST00000384525 104 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 SNORA40-201ENST00000388090 126 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SF3B3Q15393 RNU2-70P-201ENST00000410718 179 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 MTND4LP9-201ENST00000427694 174 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 RNU6-1053P-201ENST00000515930 101 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 MIR4303-201ENST00000581299 66 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 AC022217.4-201ENST00000604389 163 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.14□□□□□ -2.07
SF3B3Q15393 Y_RNA.486-201ENST00000384398 107 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 SNORA20-201ENST00000384662 132 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AP1B1P2-201ENST00000416196 106 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AC245047.4-201ENST00000433189 144 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AL606517.2-201ENST00000442855 241 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AC108729.3-201ENST00000513484 108 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 RNU6-126P-201ENST00000516685 103 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 AC245060.5-201ENST00000610778 3293 ntBASIC2.13□□□□□ -2.07
SF3B3Q15393 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
SF3B3Q15393 Y_RNA.66-201ENST00000362862 102 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 SNORA12.1-201ENST00000390873 148 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 SNORA26-201ENST00000391286 122 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 AL049830.1-201ENST00000468034 425 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.12□□□□□ -2.07
SF3B3Q15393 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.12□□□□□ -2.07
SF3B3Q15393 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
SF3B3Q15393 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
SF3B3Q15393 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SF3B3Q15393 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SF3B3Q15393 MIR126-201ENST00000362291 85 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 RNU6-1336P-201ENST00000383886 109 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 RNU6-22P-201ENST00000384355 107 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 MIR522-201ENST00000385071 87 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 RNU6-460P-201ENST00000391158 108 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 AC008507.4-201ENST00000585464 127 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 AC087685.1-201ENST00000587507 141 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 AP001340.1-201ENST00000624405 217 ntBASIC2.11□□□□□ -2.07
SF3B3Q15393 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SF3B3Q15393 SNORA25.7-201ENST00000364375 127 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 Y_RNA.542-201ENST00000384641 111 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 SNORD72-201ENST00000390994 80 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SF3B3Q15393 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 MIR4762-201ENST00000585261 75 ntBASIC2.1□□□□□ -2.07
SF3B3Q15393 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SF3B3Q15393 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SF3B3Q15393 Y_RNA.164-201ENST00000363709 102 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU6-1081P-201ENST00000384537 107 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNA5SP109-201ENST00000391010 116 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 AC245047.3-201ENST00000429428 127 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU6-479P-201ENST00000516348 105 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU2-56P-201ENST00000516826 190 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU6-365P-201ENST00000517113 106 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 AC084364.2-201ENST00000546924 395 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 MIR548AI-201ENST00000579940 88 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
SF3B3Q15393 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 U8.5-201ENST00000364528 136 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.08□□□□□ -2.08
SF3B3Q15393 RNU6-62P-201ENST00000516526 102 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 RNU6-971P-201ENST00000516920 106 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 Y_RNA.714-201ENST00000517065 90 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 AC007751.1-201ENST00000529260 376 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.08□□□□□ -2.08
SF3B3Q15393 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SF3B3Q15393 Y_RNA.218-201ENST00000364218 104 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SF3B3Q15393 RNA5SP465-201ENST00000391195 109 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 RNU2-51P-201ENST00000410708 197 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3B3Q15393 AC090142.3-201ENST00000519012 385 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 AL365205.2-201ENST00000594586 68 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 TUG1_4.1-201ENST00000619464 181 ntBASIC2.07□□□□□ -2.08
SF3B3Q15393 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.07□□□□□ -2.08
SF3B3Q15393 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SF3B3Q15393 Y_RNA.242-201ENST00000364473 110 ntBASIC2.06□□□□□ -2.08
SF3B3Q15393 SNORD50B-201ENST00000364995 70 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms