Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-228P-201ENST00000362700 106 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-740P-201ENST00000364734 105 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORA1.2-201ENST00000365189 134 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 MT-TF-201ENST00000387314 71 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORD37.1-201ENST00000390968 65 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORD72-201ENST00000390994 80 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-332P-201ENST00000391193 108 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNA5SP494-201ENST00000410653 129 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-847P-201ENST00000411115 108 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 Z82188.1-201ENST00000436709 154 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL353572.1-201ENST00000442490 417 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-274P-201ENST00000459566 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC022137.1-201ENST00000483735 151 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNA5SP272-201ENST00000516095 111 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-453P-201ENST00000516819 85 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-341P-201ENST00000516973 96 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AP003461.1-201ENST00000528866 78 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL080274.1-201ENST00000605565 220 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORA70.25-201ENST00000612741 95 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL158209.2-201ENST00000619266 216 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AP002371.2-201ENST00000624450 503 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC009161.2-201ENST00000624626 138 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC006927.2-201ENST00000639256 389 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 MIR410-201ENST00000362222 80 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORD115-2-201ENST00000362842 82 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-181P-201ENST00000363225 107 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORD50B-201ENST00000364995 70 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-74P-201ENST00000384235 107 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORA27-201ENST00000384323 126 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-606P-201ENST00000384721 111 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-440P-201ENST00000390882 105 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
COL7A1Q02388 MIR876-201ENST00000401147 81 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL606923.1-201ENST00000406616 190 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNA5SP163-201ENST00000410304 99 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 MTND1P14-201ENST00000427400 950 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MTND1P34-201ENST00000438556 671 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 ZNF114P1-201ENST00000453500 292 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 TPTE2P5-203ENST00000458118 728 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 U8.22-201ENST00000459141 133 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU7-104P-201ENST00000459398 79 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RPL39P34-201ENST00000477141 156 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC116353.2-201ENST00000505332 712 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC079140.5-201ENST00000507882 310 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU2-69P-201ENST00000516061 100 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORD22.1-201ENST00000516331 125 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNA5SP470-201ENST00000516463 106 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-445P-201ENST00000516949 107 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-958P-201ENST00000516995 106 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNA5SP169-201ENST00000517268 117 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AP003072.1-201ENST00000531740 145 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 MIR3145-201ENST00000580727 82 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MIR4280-201ENST00000582178 76 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL133215.3-201ENST00000609801 448 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 uc_338.28-201ENST00000612082 187 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MIR6854-201ENST00000614935 69 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC011476.5-201ENST00000615594 130 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC009878.1-201ENST00000621819 340 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 U6.115-201ENST00000636045 103 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC068137.4-201ENST00000638485 296 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MIR302B-201ENST00000362188 73 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNA5SP117-201ENST00000365294 118 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-449P-201ENST00000383914 107 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORD61-201ENST00000384252 73 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 SNORA26.6-201ENST00000391256 115 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL161932.1-201ENST00000437408 146 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MRPS10P1-201ENST00000448483 130 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 snoU13.13-201ENST00000458842 104 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU7-55P-201ENST00000459426 62 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU7-79P-201ENST00000516082 62 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 RNA5SP66-201ENST00000517178 101 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 MTND5P40-201ENST00000559945 246 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 241.3 ms