Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 Y_RNA.65-201ENST00000362846 100 ntBASIC1.04□□□□□ -2.24
SRPXP78539 RNU6-653P-201ENST00000363074 106 ntBASIC1.04□□□□□ -2.24
SRPXP78539 Y_RNA.269-201ENST00000364685 89 ntBASIC1.04□□□□□ -2.24
SRPXP78539 RNU6-702P-201ENST00000364982 107 ntBASIC1.04□□□□□ -2.24
SRPXP78539 Y_RNA.307-201ENST00000365022 117 ntBASIC1.04□□□□□ -2.24
SRPXP78539 Y_RNA.350-201ENST00000365409 98 ntBASIC1.04□□□□□ -2.24
SRPXP78539 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
SRPXP78539 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.04□□□□□ -2.24
SRPXP78539 RNU1-123P-201ENST00000458950 160 ntBASIC1.04□□□□□ -2.24
SRPXP78539 RNU7-41P-201ENST00000515917 61 ntBASIC1.04□□□□□ -2.24
SRPXP78539 SNORA31.2-201ENST00000516019 134 ntBASIC1.04□□□□□ -2.24
SRPXP78539 SNORD77.4-201ENST00000516158 81 ntBASIC1.04□□□□□ -2.24
SRPXP78539 RNY3P16-201ENST00000516338 101 ntBASIC1.04□□□□□ -2.24
SRPXP78539 AL442067.1-201ENST00000613261 223 ntBASIC1.04□□□□□ -2.24
SRPXP78539 Pinc.1-201ENST00000616452 154 ntBASIC1.04□□□□□ -2.24
SRPXP78539 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
SRPXP78539 7SK.10-201ENST00000621414 298 ntBASIC1.04□□□□□ -2.24
SRPXP78539 Y_RNA.292-201ENST00000364904 97 ntBASIC1.03□□□□□ -2.24
SRPXP78539 Y_RNA.452-201ENST00000384202 108 ntBASIC1.03□□□□□ -2.24
SRPXP78539 SNORD38C-201ENST00000384381 69 ntBASIC1.03□□□□□ -2.24
SRPXP78539 Y_RNA.486-201ENST00000384398 107 ntBASIC1.03□□□□□ -2.24
SRPXP78539 MIR570-201ENST00000384917 97 ntBASIC1.03□□□□□ -2.24
SRPXP78539 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
SRPXP78539 CYCSP49-201ENST00000420810 319 ntBASIC1.03□□□□□ -2.24
SRPXP78539 AC023449.1-201ENST00000454464 154 ntBASIC1.03□□□□□ -2.24
SRPXP78539 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
SRPXP78539 Y_RNA.666-201ENST00000516187 112 ntBASIC1.03□□□□□ -2.24
SRPXP78539 RNU7-25P-201ENST00000516544 62 ntBASIC1.03□□□□□ -2.24
SRPXP78539 RNU6-548P-201ENST00000517083 115 ntBASIC1.03□□□□□ -2.24
SRPXP78539 RNU7-181P-201ENST00000517234 74 ntBASIC1.03□□□□□ -2.24
SRPXP78539 AL357312.1-201ENST00000603879 298 ntBASIC1.03□□□□□ -2.24
SRPXP78539 AC006441.5-201ENST00000612680 209 ntBASIC1.03□□□□□ -2.24
SRPXP78539 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SRPXP78539 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SRPXP78539 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
SRPXP78539 RNA5SP190-201ENST00000365222 118 ntBASIC1.02□□□□□ -2.25
SRPXP78539 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
SRPXP78539 Y_RNA.447-201ENST00000384184 113 ntBASIC1.02□□□□□ -2.25
SRPXP78539 RNU6-463P-201ENST00000384340 107 ntBASIC1.02□□□□□ -2.25
SRPXP78539 MIR520C-201ENST00000385005 87 ntBASIC1.02□□□□□ -2.25
SRPXP78539 snoU13.23-201ENST00000458863 104 ntBASIC1.02□□□□□ -2.25
SRPXP78539 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.02□□□□□ -2.25
SRPXP78539 AC090821.2-201ENST00000523552 176 ntBASIC1.02□□□□□ -2.25
SRPXP78539 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
SRPXP78539 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
SRPXP78539 MIR4764-201ENST00000580680 88 ntBASIC1.02□□□□□ -2.25
SRPXP78539 MIR548AR-201ENST00000582191 57 ntBASIC1.02□□□□□ -2.25
SRPXP78539 MIR4298-201ENST00000584380 73 ntBASIC1.02□□□□□ -2.25
SRPXP78539 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
SRPXP78539 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SRPXP78539 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
SRPXP78539 RNU6-1138P-201ENST00000365359 106 ntBASIC1.01□□□□□ -2.25
SRPXP78539 RNU6-381P-201ENST00000391259 108 ntBASIC1.01□□□□□ -2.25
SRPXP78539 MIR548O-201ENST00000408583 114 ntBASIC1.01□□□□□ -2.25
SRPXP78539 Y_RNA.622-201ENST00000411091 108 ntBASIC1.01□□□□□ -2.25
SRPXP78539 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
SRPXP78539 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
SRPXP78539 AC245047.7-201ENST00000440265 293 ntBASIC1.01□□□□□ -2.25
SRPXP78539 RPL39P39-201ENST00000455840 151 ntBASIC1.01□□□□□ -2.25
SRPXP78539 RNU6-1007P-201ENST00000516586 107 ntBASIC1.01□□□□□ -2.25
SRPXP78539 AC007751.1-201ENST00000529260 376 ntBASIC1.01□□□□□ -2.25
SRPXP78539 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.01□□□□□ -2.25
SRPXP78539 ZNF209P-201ENST00000593450 2304 ntBASIC1□□□□□ -2.25
SRPXP78539 Y_RNA.20-201ENST00000362479 113 ntBASIC1□□□□□ -2.25
SRPXP78539 Y_RNA.91-201ENST00000363042 107 ntBASIC1□□□□□ -2.25
SRPXP78539 Y_RNA.262-201ENST00000364641 102 ntBASIC1□□□□□ -2.25
SRPXP78539 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
SRPXP78539 MIR15B-201ENST00000385045 98 ntBASIC1□□□□□ -2.25
SRPXP78539 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
SRPXP78539 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
SRPXP78539 U8.17-201ENST00000391292 132 ntBASIC1□□□□□ -2.25
SRPXP78539 RNU6-493P-201ENST00000391321 108 ntBASIC1□□□□□ -2.25
SRPXP78539 AL591806.2-201ENST00000433122 173 ntBASIC1□□□□□ -2.25
SRPXP78539 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
SRPXP78539 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1□□□□□ -2.25
SRPXP78539 RNU4-57P-201ENST00000515980 135 ntBASIC1□□□□□ -2.25
SRPXP78539 RNU6-561P-201ENST00000516222 102 ntBASIC1□□□□□ -2.25
SRPXP78539 RNU6-111P-201ENST00000517179 105 ntBASIC1□□□□□ -2.25
SRPXP78539 MIR5688-201ENST00000580619 83 ntBASIC1□□□□□ -2.25
SRPXP78539 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1□□□□□ -2.25
SRPXP78539 RNU6-923P-201ENST00000364753 107 ntBASIC0.99□□□□□ -2.25
SRPXP78539 Y_RNA.308-201ENST00000365043 101 ntBASIC0.99□□□□□ -2.25
SRPXP78539 RNY4P28-201ENST00000365281 93 ntBASIC0.99□□□□□ -2.25
SRPXP78539 RNU4-17P-201ENST00000365598 141 ntBASIC0.99□□□□□ -2.25
SRPXP78539 AL606845.1-201ENST00000404881 255 ntBASIC0.99□□□□□ -2.25
SRPXP78539 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
SRPXP78539 RNU6-1054P-201ENST00000411293 104 ntBASIC0.99□□□□□ -2.25
SRPXP78539 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.99□□□□□ -2.25
SRPXP78539 RNU6-830P-201ENST00000516353 107 ntBASIC0.99□□□□□ -2.25
SRPXP78539 RNU6-1270P-201ENST00000517128 108 ntBASIC0.99□□□□□ -2.25
SRPXP78539 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
SRPXP78539 AL391903.3-201ENST00000612158 163 ntBASIC0.99□□□□□ -2.25
SRPXP78539 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SRPXP78539 RNU6-484P-201ENST00000384016 107 ntBASIC0.98□□□□□ -2.25
SRPXP78539 MIR548A2-201ENST00000384956 97 ntBASIC0.98□□□□□ -2.25
SRPXP78539 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
SRPXP78539 RNU6-1228P-201ENST00000391014 107 ntBASIC0.98□□□□□ -2.25
SRPXP78539 snosnR66.1-201ENST00000391095 99 ntBASIC0.98□□□□□ -2.25
SRPXP78539 SNRPGP8-201ENST00000454064 226 ntBASIC0.98□□□□□ -2.25
SRPXP78539 SNORD13-201ENST00000459299 104 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms