Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MIR488-201ENST00000365739 83 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 SNORA8-201ENST00000384574 139 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 MIR548D2-201ENST00000384955 97 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ERVFC1P60507 RNA5SP323-201ENST00000391094 133 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 MIR1289-2-201ENST00000408360 111 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 RNU6-938P-201ENST00000411285 103 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 AC087499.4-201ENST00000448505 178 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 AC234781.5-201ENST00000508429 271 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 RNU6-904P-201ENST00000516206 101 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 RNU6-762P-201ENST00000517107 102 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.64□□□□□ -1.99
ERVFC1P60507 MIR3683-201ENST00000580847 82 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 AL442128.1-201ENST00000615151 90 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
ERVFC1P60507 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.64□□□□□ -1.99
ERVFC1P60507 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ERVFC1P60507 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ERVFC1P60507 Y_RNA.344-201ENST00000365381 112 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 RPS3AP1-201ENST00000413190 320 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 AL445646.1-201ENST00000431784 216 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 MTATP8P2-201ENST00000435212 202 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 RNU7-164P-201ENST00000459221 62 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 RNU7-80P-201ENST00000459562 61 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 AL163195.1-201ENST00000496941 348 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 SNORD36C-201ENST00000516733 66 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 RNU7-70P-201ENST00000516941 66 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 SUMO2P16-201ENST00000519475 264 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 AC046143.2-201ENST00000609789 160 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
ERVFC1P60507 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.63□□□□□ -1.99
ERVFC1P60507 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ERVFC1P60507 SNORD68-201ENST00000363214 84 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 Y_RNA.220-201ENST00000364244 109 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 SNORA25B-201ENST00000365507 128 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 RNU6-160P-201ENST00000384591 107 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 RNA5SP482-201ENST00000391269 118 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
ERVFC1P60507 SNORD45.4-201ENST00000516629 73 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 RNU7-28P-201ENST00000516759 62 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 MIR4778-201ENST00000577635 80 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 MIR3163-201ENST00000581592 73 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.62□□□□□ -1.99
ERVFC1P60507 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ERVFC1P60507 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ERVFC1P60507 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
ERVFC1P60507 MIR302B-201ENST00000362188 73 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU6-1084P-201ENST00000362498 107 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 Y_RNA.93-201ENST00000363066 109 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 Y_RNA.454-201ENST00000384224 113 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU6-1104P-201ENST00000384723 104 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 MIR764-201ENST00000390811 85 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU6-220P-201ENST00000390919 107 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 U8.17-201ENST00000391292 132 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 AL627390.1-201ENST00000396055 340 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU7-123P-201ENST00000515911 60 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU6-109P-201ENST00000516364 107 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 RNU6-184P-201ENST00000516514 107 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 AP003484.1-201ENST00000530974 250 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 MIR4305-201ENST00000583252 102 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 AL162726.3-218ENST00000636401 95 ntBASIC2.61□□□□□ -1.99
ERVFC1P60507 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.61□□□□□ -1.99
ERVFC1P60507 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.6□□□□□ -1.99
ERVFC1P60507 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 AL356320.1-201ENST00000429616 163 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 snoU13.23-201ENST00000458863 104 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 RN7SL297P-201ENST00000483161 293 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ERVFC1P60507 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ERVFC1P60507 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
ERVFC1P60507 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
ERVFC1P60507 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
ERVFC1P60507 AL442644.1-201ENST00000454390 3105 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 Y_RNA.351-201ENST00000365436 96 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 SNORA80E-201ENST00000384744 137 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 MIR1912-201ENST00000410389 80 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 SNORA19.1-201ENST00000410656 129 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 AC015712.3-201ENST00000559380 164 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 MIR1273D-201ENST00000577266 86 ntBASIC2.59□□□□□ -1.99
ERVFC1P60507 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
ERVFC1P60507 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1P60507 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1P60507 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
ERVFC1P60507 AL591806.2-201ENST00000433122 173 ntBASIC2.58□□□□□ -2
ERVFC1P60507 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
ERVFC1P60507 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.58□□□□□ -2
ERVFC1P60507 AC091932.4-201ENST00000623386 200 ntBASIC2.58□□□□□ -2
ERVFC1P60507 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
ERVFC1P60507 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1P60507 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1P60507 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1P60507 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms