Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 SNORD115-5-201ENST00000363633 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-39-201ENST00000363694 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-4-201ENST00000363810 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-16-201ENST00000363887 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-6-201ENST00000363942 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-42-201ENST00000364273 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 RNU4-36P-201ENST00000364294 144 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-15-201ENST00000364809 81 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-1-201ENST00000364961 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-26-201ENST00000365067 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-10-201ENST00000365073 81 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-43-201ENST00000365503 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 SNORD115-36-201ENST00000365629 82 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 RN7SKP192-201ENST00000411291 327 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 AL139132.1-201ENST00000431587 344 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.16□□□□□ -1.9
MCCD1P59942 AC113410.1-201ENST00000505029 247 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 RNU6-958P-201ENST00000516995 106 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.16□□□□□ -1.9
MCCD1P59942 AL442128.1-201ENST00000615151 90 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 AC087741.2-201ENST00000619415 172 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 FO624990.1-201ENST00000636373 85 ntBASIC3.16□□□□□ -1.9
MCCD1P59942 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MCCD1P59942 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MCCD1P59942 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 SNORA9-201ENST00000384215 133 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 RNU1-148P-201ENST00000384472 162 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 Y_RNA.507-201ENST00000384500 99 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 AC069257.2-201ENST00000441819 155 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 AL135938.1-201ENST00000443141 297 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 RNU7-67P-201ENST00000459003 62 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 Y_RNA.773-201ENST00000607168 90 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 MIR2052-201ENST00000636055 55 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 MIR1255B1-201ENST00000636325 63 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 AC092881.1-201ENST00000638218 2733 ntBASIC3.15□□□□□ -1.91
MCCD1P59942 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
MCCD1P59942 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MCCD1P59942 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MCCD1P59942 Y_RNA.107-201ENST00000363190 121 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 Y_RNA.171-201ENST00000363760 102 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 SNORA70.4-201ENST00000365509 134 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 Y_RNA.370-201ENST00000365589 108 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
MCCD1P59942 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 RNU7-113P-201ENST00000459273 62 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 RNU7-34P-201ENST00000459394 64 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 RNVU1-2-201ENST00000516326 135 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 RNU6-844P-201ENST00000517175 102 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
MCCD1P59942 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 MALAT1.1-201ENST00000618249 95 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 AC095038.3-201ENST00000634439 195 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 MIR203B-201ENST00000636080 86 ntBASIC3.14□□□□□ -1.91
MCCD1P59942 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
MCCD1P59942 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MCCD1P59942 RNU6-833P-201ENST00000363486 107 ntBASIC3.13□□□□□ -1.91
MCCD1P59942 RNU1-138P-201ENST00000384093 164 ntBASIC3.13□□□□□ -1.91
MCCD1P59942 PGBD4P5-201ENST00000445958 426 ntBASIC3.13□□□□□ -1.91
MCCD1P59942 RPS23P4-201ENST00000487908 423 ntBASIC3.13□□□□□ -1.91
MCCD1P59942 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.13□□□□□ -1.91
MCCD1P59942 FAM71BP1-201ENST00000604431 523 ntBASIC3.13□□□□□ -1.91
MCCD1P59942 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
MCCD1P59942 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MCCD1P59942 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MCCD1P59942 SNORA44-201ENST00000384584 132 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 RNU6-950P-201ENST00000384651 107 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 SCARNA23-201ENST00000516060 130 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 MIR3618-201ENST00000580330 88 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 AC062037.1-201ENST00000605302 128 ntBASIC3.12□□□□□ -1.91
MCCD1P59942 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MCCD1P59942 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
MCCD1P59942 Y_RNA.93-201ENST00000363066 109 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 RNU6-1134P-201ENST00000365156 101 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 RNU6-1031P-201ENST00000384773 107 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MCCD1P59942 RNA5SP270-201ENST00000411361 118 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 POLR2J4-204ENST00000418424 324 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.11□□□□□ -1.91
MCCD1P59942 AC103810.6-201ENST00000606708 136 ntBASIC3.11□□□□□ -1.91
MCCD1P59942 SNORA1.2-201ENST00000365189 134 ntBASIC3.1□□□□□ -1.91
MCCD1P59942 SNORA7.5-201ENST00000410672 110 ntBASIC3.1□□□□□ -1.91
MCCD1P59942 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
MCCD1P59942 AC011753.1-201ENST00000451001 220 ntBASIC3.1□□□□□ -1.91
MCCD1P59942 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.1□□□□□ -1.91
MCCD1P59942 SNORD14A-201ENST00000606526 91 ntBASIC3.1□□□□□ -1.91
MCCD1P59942 AC064859.1-201ENST00000624741 174 ntBASIC3.1□□□□□ -1.91
MCCD1P59942 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.1□□□□□ -1.91
MCCD1P59942 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.1□□□□□ -1.91
MCCD1P59942 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
MCCD1P59942 Y_RNA.342-201ENST00000365352 113 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms