Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC093850.1-201ENST00000454121 251 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 RNU6-313P-201ENST00000516317 112 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 Y_RNA.690-201ENST00000516603 95 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 Y_RNA.692-201ENST00000516627 105 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 AC121758.2-201ENST00000553271 193 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 AC078899.2-201ENST00000595282 212 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CLRN1P58418 MIR449A-201ENST00000362113 91 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 RNU6-309P-201ENST00000364573 106 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 Y_RNA.261-201ENST00000364631 102 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 SNORA22C-201ENST00000384614 134 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 MIR221-201ENST00000385135 110 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 RNU6-1168P-201ENST00000390831 104 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 AL603914.1-201ENST00000401964 204 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 AC015922.2-201ENST00000435593 184 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 AC008267.6-201ENST00000441664 139 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 RNU6-1149P-201ENST00000516810 97 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 Y_RNA.757-201ENST00000578934 114 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 MIR4672-201ENST00000583126 81 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 MIR5197-201ENST00000583721 112 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 AL513423.1-201ENST00000621695 132 ntBASIC1.98□□□□□ -2.09
CLRN1P58418 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLRN1P58418 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.98□□□□□ -2.09
CLRN1P58418 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLRN1P58418 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLRN1P58418 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 Y_RNA.127-201ENST00000363386 109 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD116-14-201ENST00000383894 92 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD116-17-201ENST00000383929 92 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 RNU6-1189P-201ENST00000383958 107 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 Y_RNA.410-201ENST00000383992 113 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 RNU6-80P-201ENST00000384195 107 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD116-15-201ENST00000384445 92 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD116-19-201ENST00000384729 92 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 PGBD4P5-201ENST00000445958 426 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 RNU5E-3P-201ENST00000515913 68 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 RNU4-57P-201ENST00000515980 135 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 RNU6-1333P-201ENST00000516162 93 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD36C-201ENST00000516733 66 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SCARNA15-202ENST00000516881 127 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
CLRN1P58418 MIR4778-201ENST00000577635 80 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 MIR3121-201ENST00000579680 77 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
CLRN1P58418 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
CLRN1P58418 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 RNU6-360P-201ENST00000390944 104 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 RNU4-53P-201ENST00000410828 140 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 RNU6-938P-201ENST00000411285 103 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
CLRN1P58418 MIR4298-201ENST00000584380 73 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLRN1P58418 AC005336.3-201ENST00000623833 2679 ntBASIC1.96□□□□□ -2.1
CLRN1P58418 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.95□□□□□ -2.1
CLRN1P58418 RNU6-235P-201ENST00000362644 107 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 Y_RNA.114-201ENST00000363265 113 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 RNU6-301P-201ENST00000384277 107 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 MIR516B2-201ENST00000385190 85 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 MTATP6P21-201ENST00000440681 189 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.95□□□□□ -2.1
CLRN1P58418 RNA5SP236-201ENST00000516169 116 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 RNU6-830P-201ENST00000516353 107 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 AP003484.1-201ENST00000530974 250 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
CLRN1P58418 AL022345.2-201ENST00000606307 135 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 AL442644.1-201ENST00000454390 3105 ntBASIC1.95□□□□□ -2.1
CLRN1P58418 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLRN1P58418 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 RNU4-82P-201ENST00000362443 140 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 SNORA2.2-201ENST00000365473 135 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 MIR452-201ENST00000385020 85 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 RNU7-107P-201ENST00000459121 61 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 Y_RNA.651-201ENST00000459380 103 ntBASIC1.94□□□□□ -2.1
CLRN1P58418 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLRN1P58418 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLRN1P58418 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLRN1P58418 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLRN1P58418 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLRN1P58418 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLRN1P58418 Y_RNA.280-201ENST00000364765 112 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 Y_RNA.525-201ENST00000384570 113 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 AL158147.1-201ENST00000443970 75 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 AC087499.4-201ENST00000448505 178 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
CLRN1P58418 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
CLRN1P58418 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLRN1P58418 ZNF720P1-201ENST00000562403 1939 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 Y_RNA.440-201ENST00000384120 114 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.92□□□□□ -2.1
CLRN1P58418 RNU6-659P-201ENST00000516454 104 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms