Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 Y_RNA.274-201ENST00000364714 101 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU6-484P-201ENST00000384016 107 ntBASIC1.19□□□□□ -2.22
PAX9P55771 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
PAX9P55771 AL606845.1-201ENST00000404881 255 ntBASIC1.19□□□□□ -2.22
PAX9P55771 SNRPGP8-201ENST00000454064 226 ntBASIC1.19□□□□□ -2.22
PAX9P55771 AC023449.1-201ENST00000454464 154 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RN7SKP164-201ENST00000516138 266 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU6-561P-201ENST00000516222 102 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU6-1007P-201ENST00000516586 107 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU6-548P-201ENST00000517083 115 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
PAX9P55771 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PAX9P55771 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
PAX9P55771 RNU2-4P-201ENST00000606190 192 ntBASIC1.19□□□□□ -2.22
PAX9P55771 BX248123.2-201ENST00000606318 124 ntBASIC1.19□□□□□ -2.22
PAX9P55771 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
PAX9P55771 MIR411-201ENST00000362239 96 ntBASIC1.18□□□□□ -2.22
PAX9P55771 Y_RNA.476-201ENST00000384347 108 ntBASIC1.18□□□□□ -2.22
PAX9P55771 RNU6-1065P-201ENST00000384513 106 ntBASIC1.18□□□□□ -2.22
PAX9P55771 MIR136-201ENST00000385207 82 ntBASIC1.18□□□□□ -2.22
PAX9P55771 MIR802-201ENST00000390235 94 ntBASIC1.18□□□□□ -2.22
PAX9P55771 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
PAX9P55771 MIR1323-201ENST00000408090 73 ntBASIC1.18□□□□□ -2.22
PAX9P55771 Y_RNA.622-201ENST00000411091 108 ntBASIC1.18□□□□□ -2.22
PAX9P55771 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.18□□□□□ -2.22
PAX9P55771 Y_RNA.666-201ENST00000516187 112 ntBASIC1.18□□□□□ -2.22
PAX9P55771 AL160236.1-201ENST00000556317 195 ntBASIC1.18□□□□□ -2.22
PAX9P55771 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.18□□□□□ -2.22
PAX9P55771 AC141273.2-201ENST00000618989 130 ntBASIC1.18□□□□□ -2.22
PAX9P55771 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
PAX9P55771 Y_RNA.83-201ENST00000363005 113 ntBASIC1.17□□□□□ -2.22
PAX9P55771 Y_RNA.91-201ENST00000363042 107 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNU6-47P-201ENST00000383866 107 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNY3P5-201ENST00000384127 102 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNU6-1228P-201ENST00000391014 107 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNU6-918P-201ENST00000391219 106 ntBASIC1.17□□□□□ -2.22
PAX9P55771 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.17□□□□□ -2.22
PAX9P55771 RNU6-322P-201ENST00000516010 103 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNU6-830P-201ENST00000516353 107 ntBASIC1.17□□□□□ -2.22
PAX9P55771 RNU7-25P-201ENST00000516544 62 ntBASIC1.17□□□□□ -2.22
PAX9P55771 AC007751.1-201ENST00000529260 376 ntBASIC1.17□□□□□ -2.22
PAX9P55771 CYP3A52P-201ENST00000563326 91 ntBASIC1.17□□□□□ -2.22
PAX9P55771 GHRLOS.1-201ENST00000610995 70 ntBASIC1.17□□□□□ -2.22
PAX9P55771 AL121890.5-201ENST00000620848 304 ntBASIC1.17□□□□□ -2.22
PAX9P55771 Y_RNA.7-201ENST00000362352 102 ntBASIC1.16□□□□□ -2.22
PAX9P55771 SNORD45.3-201ENST00000363836 72 ntBASIC1.16□□□□□ -2.22
PAX9P55771 Y_RNA.238-201ENST00000364441 102 ntBASIC1.16□□□□□ -2.22
PAX9P55771 RNA5SP190-201ENST00000365222 118 ntBASIC1.16□□□□□ -2.22
PAX9P55771 SNORD38C-201ENST00000384381 69 ntBASIC1.16□□□□□ -2.22
PAX9P55771 Y_RNA.571-201ENST00000384753 98 ntBASIC1.16□□□□□ -2.22
PAX9P55771 MIR548A2-201ENST00000384956 97 ntBASIC1.16□□□□□ -2.22
PAX9P55771 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
PAX9P55771 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PAX9P55771 CYCSP49-201ENST00000420810 319 ntBASIC1.16□□□□□ -2.22
PAX9P55771 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
PAX9P55771 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
PAX9P55771 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.16□□□□□ -2.22
PAX9P55771 MIR4662B-201ENST00000579498 81 ntBASIC1.16□□□□□ -2.22
PAX9P55771 AC108706.1-201ENST00000611053 297 ntBASIC1.16□□□□□ -2.22
PAX9P55771 AC015726.2-201ENST00000620112 122 ntBASIC1.16□□□□□ -2.22
PAX9P55771 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
PAX9P55771 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.22
PAX9P55771 Y_RNA.66-201ENST00000362862 102 ntBASIC1.15□□□□□ -2.23
PAX9P55771 RNU6-103P-201ENST00000363686 107 ntBASIC1.15□□□□□ -2.23
PAX9P55771 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
PAX9P55771 Y_RNA.552-201ENST00000384665 112 ntBASIC1.15□□□□□ -2.23
PAX9P55771 SNORD28B-201ENST00000390993 75 ntBASIC1.15□□□□□ -2.23
PAX9P55771 MIR548O-201ENST00000408583 114 ntBASIC1.15□□□□□ -2.23
PAX9P55771 RNU2-55P-201ENST00000411146 174 ntBASIC1.15□□□□□ -2.23
PAX9P55771 AL591806.2-201ENST00000433122 173 ntBASIC1.15□□□□□ -2.23
PAX9P55771 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
PAX9P55771 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
PAX9P55771 RPL30P7-201ENST00000479312 323 ntBASIC1.15□□□□□ -2.23
PAX9P55771 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.15□□□□□ -2.23
PAX9P55771 RNU4-57P-201ENST00000515980 135 ntBASIC1.15□□□□□ -2.23
PAX9P55771 RNU6-1299P-201ENST00000516316 100 ntBASIC1.15□□□□□ -2.23
PAX9P55771 AC109810.1-201ENST00000534066 224 ntBASIC1.15□□□□□ -2.23
PAX9P55771 MIR4744-201ENST00000581563 82 ntBASIC1.15□□□□□ -2.23
PAX9P55771 AP001485.1-201ENST00000604799 199 ntBASIC1.15□□□□□ -2.23
PAX9P55771 AL096861.1-201ENST00000610899 123 ntBASIC1.15□□□□□ -2.23
PAX9P55771 Y_RNA.121-201ENST00000363309 113 ntBASIC1.14□□□□□ -2.23
PAX9P55771 Y_RNA.242-201ENST00000364473 110 ntBASIC1.14□□□□□ -2.23
PAX9P55771 Y_RNA.634-201ENST00000364811 113 ntBASIC1.14□□□□□ -2.23
PAX9P55771 Y_RNA.297-201ENST00000364950 91 ntBASIC1.14□□□□□ -2.23
PAX9P55771 Y_RNA.432-201ENST00000384087 111 ntBASIC1.14□□□□□ -2.23
PAX9P55771 SNORD61-201ENST00000384252 73 ntBASIC1.14□□□□□ -2.23
PAX9P55771 Y_RNA.547-201ENST00000384654 119 ntBASIC1.14□□□□□ -2.23
PAX9P55771 MIR518F-201ENST00000384973 87 ntBASIC1.14□□□□□ -2.23
PAX9P55771 RNU6-578P-201ENST00000390980 103 ntBASIC1.14□□□□□ -2.23
PAX9P55771 SNORA67.5-201ENST00000391036 107 ntBASIC1.14□□□□□ -2.23
PAX9P55771 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.14□□□□□ -2.23
PAX9P55771 SNORD13-201ENST00000459299 104 ntBASIC1.14□□□□□ -2.23
PAX9P55771 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
PAX9P55771 MIR4298-201ENST00000584380 73 ntBASIC1.14□□□□□ -2.23
PAX9P55771 MIR3192-201ENST00000584920 77 ntBASIC1.14□□□□□ -2.23
PAX9P55771 AC097639.2-201ENST00000603159 172 ntBASIC1.14□□□□□ -2.23
PAX9P55771 MIR7843-201ENST00000622274 79 ntBASIC1.14□□□□□ -2.23
PAX9P55771 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
PAX9P55771 U8.1-201ENST00000362843 134 ntBASIC1.13□□□□□ -2.23
PAX9P55771 Y_RNA.257-201ENST00000364596 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms