Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-192P-201ENST00000391253 100 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 SPINT5P-201ENST00000448174 155 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 RNU6-759P-201ENST00000516740 103 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 RNU7-116P-201ENST00000516940 62 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 ZNF519P2-201ENST00000557032 169 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 AC112487.2-201ENST00000637950 304 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
NUP98P52948 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
NUP98P52948 SNORA40.9-201ENST00000515895 93 ntBASIC-0.72□□□□□ -2.52
NUP98P52948 RNU6-436P-201ENST00000516171 114 ntBASIC-0.72□□□□□ -2.52
NUP98P52948 AP001328.1-201ENST00000528550 176 ntBASIC-0.72□□□□□ -2.52
NUP98P52948 Z97988.1-201ENST00000637697 135 ntBASIC-0.72□□□□□ -2.52
NUP98P52948 SNORA25.7-201ENST00000364375 127 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AL031003.1-201ENST00000404229 172 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.73□□□□□ -2.53
NUP98P52948 MIR3152-201ENST00000579801 74 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AC073648.5-201ENST00000603502 305 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 RNU1-29P-201ENST00000606574 126 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AL442067.1-201ENST00000613261 223 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 RNU6-726P-201ENST00000364680 107 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 RNU6-601P-201ENST00000384540 107 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.73□□□□□ -2.53
NUP98P52948 MIR2355-201ENST00000517199 87 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 MIR4528-201ENST00000577763 90 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 MIR2681-201ENST00000581814 105 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AC125232.2-201ENST00000592457 143 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 AC004223.4-201ENST00000612426 332 ntBASIC-0.73□□□□□ -2.53
NUP98P52948 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 RPL30P15-201ENST00000457129 321 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 MIR3165-201ENST00000579874 75 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 MIR4491-201ENST00000581087 68 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 AC245884.10-201ENST00000597355 337 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 AC063944.3-201ENST00000609969 533 ntBASIC-0.74□□□□□ -2.53
NUP98P52948 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 MIR587-201ENST00000384845 96 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 RNU6-710P-201ENST00000410424 105 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.75□□□□□ -2.53
NUP98P52948 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.75□□□□□ -2.53
NUP98P52948 RNU6-504P-201ENST00000516568 104 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 RNU6-897P-201ENST00000517135 105 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 AC138749.4-201ENST00000563970 127 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 AC109347.2-201ENST00000610220 349 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 SNORD114-3-201ENST00000364969 75 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 MIR588-201ENST00000384900 83 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 Z69908.1-201ENST00000622603 247 ntBASIC-0.75□□□□□ -2.53
NUP98P52948 MIR101-2-201ENST00000362195 79 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 RNU6-403P-201ENST00000363163 104 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 RNU2-61P-201ENST00000411069 191 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.76□□□□□ -2.53
NUP98P52948 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.76□□□□□ -2.53
NUP98P52948 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.76□□□□□ -2.53
NUP98P52948 AC008507.4-201ENST00000585464 127 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 U7.6-201ENST00000610841 64 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 AC073869.9-201ENST00000641610 120 ntBASIC-0.76□□□□□ -2.53
NUP98P52948 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 RNU6-961P-201ENST00000363893 105 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 RNU6-10P-201ENST00000384036 107 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 RNU6-811P-201ENST00000384069 107 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 SNORA3B-201ENST00000391305 131 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 AL138752.1-201ENST00000452964 351 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 SNORD5.1-201ENST00000458800 75 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 RNU2-11P-201ENST00000459191 187 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 AC010424.1-201ENST00000506336 297 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 SNORA27.4-201ENST00000516650 95 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 RNU6-232P-201ENST00000517144 64 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.77□□□□□ -2.53
NUP98P52948 MIR4677-201ENST00000584153 80 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 MIR4320-201ENST00000636981 65 ntBASIC-0.77□□□□□ -2.53
NUP98P52948 MIR30D-201ENST00000362283 70 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-34-201ENST00000362441 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-12-201ENST00000362583 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-29-201ENST00000362834 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-9-201ENST00000362912 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-21-201ENST00000362963 81 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-14-201ENST00000363090 81 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-13-201ENST00000363358 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-11-201ENST00000363616 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-5-201ENST00000363633 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-39-201ENST00000363694 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-4-201ENST00000363810 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-16-201ENST00000363887 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-6-201ENST00000363942 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-42-201ENST00000364273 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 RNA5SP192-201ENST00000364404 120 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-15-201ENST00000364809 81 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-1-201ENST00000364961 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-26-201ENST00000365067 82 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms