Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
NEK3P51956 MIR4764-201ENST00000580680 88 ntBASIC1.51□□□□□ -2.17
NEK3P51956 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
NEK3P51956 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
NEK3P51956 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
NEK3P51956 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NEK3P51956 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NEK3P51956 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
NEK3P51956 SNORA1.2-201ENST00000365189 134 ntBASIC1.5□□□□□ -2.17
NEK3P51956 Y_RNA.370-201ENST00000365589 108 ntBASIC1.5□□□□□ -2.17
NEK3P51956 SNORA26-201ENST00000391286 122 ntBASIC1.5□□□□□ -2.17
NEK3P51956 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
NEK3P51956 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
NEK3P51956 MTND3P2-201ENST00000438452 342 ntBASIC1.5□□□□□ -2.17
NEK3P51956 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
NEK3P51956 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.5□□□□□ -2.17
NEK3P51956 Y_RNA.668-201ENST00000516233 93 ntBASIC1.5□□□□□ -2.17
NEK3P51956 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
NEK3P51956 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
NEK3P51956 AL049861.1-201ENST00000603130 150 ntBASIC1.5□□□□□ -2.17
NEK3P51956 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.5□□□□□ -2.17
NEK3P51956 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.5□□□□□ -2.17
NEK3P51956 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
NEK3P51956 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
NEK3P51956 Y_RNA.478-201ENST00000384358 107 ntBASIC1.49□□□□□ -2.17
NEK3P51956 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
NEK3P51956 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
NEK3P51956 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.49□□□□□ -2.17
NEK3P51956 RNU6-1132P-201ENST00000459214 107 ntBASIC1.49□□□□□ -2.17
NEK3P51956 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
NEK3P51956 AL391903.3-201ENST00000612158 163 ntBASIC1.49□□□□□ -2.17
NEK3P51956 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
NEK3P51956 U4.1-201ENST00000620349 87 ntBASIC1.49□□□□□ -2.17
NEK3P51956 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
NEK3P51956 Y_RNA.24-201ENST00000362508 103 ntBASIC1.48□□□□□ -2.17
NEK3P51956 Y_RNA.229-201ENST00000364347 113 ntBASIC1.48□□□□□ -2.17
NEK3P51956 Y_RNA.416-201ENST00000384014 113 ntBASIC1.48□□□□□ -2.17
NEK3P51956 MIR568-201ENST00000385036 95 ntBASIC1.48□□□□□ -2.17
NEK3P51956 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
NEK3P51956 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NEK3P51956 RNU2-38P-201ENST00000410856 79 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AL118496.2-201ENST00000448300 230 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AC009474.2-201ENST00000451383 136 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AC048334.1-201ENST00000477975 159 ntBASIC1.48□□□□□ -2.17
NEK3P51956 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
NEK3P51956 RN7SKP164-201ENST00000516138 266 ntBASIC1.48□□□□□ -2.17
NEK3P51956 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AC019288.1-201ENST00000557918 224 ntBASIC1.48□□□□□ -2.17
NEK3P51956 AL022345.2-201ENST00000606307 135 ntBASIC1.48□□□□□ -2.17
NEK3P51956 U8.17-201ENST00000391292 132 ntBASIC1.47□□□□□ -2.17
NEK3P51956 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.47□□□□□ -2.17
NEK3P51956 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.47□□□□□ -2.17
NEK3P51956 AL442067.1-201ENST00000613261 223 ntBASIC1.47□□□□□ -2.17
NEK3P51956 Y_RNA.262-201ENST00000364641 102 ntBASIC1.46□□□□□ -2.18
NEK3P51956 SNORA70.7-201ENST00000384159 133 ntBASIC1.46□□□□□ -2.18
NEK3P51956 SNORA80D-201ENST00000384488 135 ntBASIC1.46□□□□□ -2.18
NEK3P51956 MIR616-201ENST00000385293 97 ntBASIC1.46□□□□□ -2.18
NEK3P51956 Y_RNA.587-201ENST00000391210 103 ntBASIC1.46□□□□□ -2.18
NEK3P51956 SNORD116-28-201ENST00000516123 91 ntBASIC1.46□□□□□ -2.18
NEK3P51956 PRELID3BP2-201ENST00000605362 201 ntBASIC1.46□□□□□ -2.18
NEK3P51956 AC015726.2-201ENST00000620112 122 ntBASIC1.46□□□□□ -2.18
NEK3P51956 AL365265.1-201ENST00000621045 234 ntBASIC1.46□□□□□ -2.18
NEK3P51956 AC027335.2-201ENST00000624030 375 ntBASIC1.46□□□□□ -2.18
NEK3P51956 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
NEK3P51956 SNORD24-201ENST00000383884 75 ntBASIC1.45□□□□□ -2.18
NEK3P51956 RNU6-196P-201ENST00000384315 107 ntBASIC1.45□□□□□ -2.18
NEK3P51956 SCARNA8-201ENST00000515924 131 ntBASIC1.45□□□□□ -2.18
NEK3P51956 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
NEK3P51956 MIR3192-201ENST00000584920 77 ntBASIC1.45□□□□□ -2.18
NEK3P51956 AC062037.2-201ENST00000610137 73 ntBASIC1.45□□□□□ -2.18
NEK3P51956 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NEK3P51956 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
NEK3P51956 MIR337-201ENST00000362281 93 ntBASIC1.44□□□□□ -2.18
NEK3P51956 Y_RNA.20-201ENST00000362479 113 ntBASIC1.44□□□□□ -2.18
NEK3P51956 Y_RNA.54-201ENST00000362766 105 ntBASIC1.44□□□□□ -2.18
NEK3P51956 Y_RNA.193-201ENST00000363979 102 ntBASIC1.44□□□□□ -2.18
NEK3P51956 RNU4-10P-201ENST00000364383 140 ntBASIC1.44□□□□□ -2.18
NEK3P51956 Y_RNA.350-201ENST00000365409 98 ntBASIC1.44□□□□□ -2.18
NEK3P51956 RNU6-910P-201ENST00000390844 107 ntBASIC1.44□□□□□ -2.18
NEK3P51956 RNU6-1228P-201ENST00000391014 107 ntBASIC1.44□□□□□ -2.18
NEK3P51956 SNORD58.1-201ENST00000391313 66 ntBASIC1.44□□□□□ -2.18
NEK3P51956 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
NEK3P51956 RNU6-651P-201ENST00000411040 105 ntBASIC1.44□□□□□ -2.18
NEK3P51956 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.44□□□□□ -2.18
NEK3P51956 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
NEK3P51956 RNU4-57P-201ENST00000515980 135 ntBASIC1.44□□□□□ -2.18
NEK3P51956 SNORD79.1-201ENST00000516069 84 ntBASIC1.44□□□□□ -2.18
NEK3P51956 RNU6-365P-201ENST00000517113 106 ntBASIC1.44□□□□□ -2.18
NEK3P51956 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
NEK3P51956 AC008133.2-201ENST00000624540 351 ntBASIC1.44□□□□□ -2.18
NEK3P51956 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.44□□□□□ -2.18
NEK3P51956 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
NEK3P51956 RNY1P10-201ENST00000363268 113 ntBASIC1.43□□□□□ -2.18
NEK3P51956 Y_RNA.277-201ENST00000364754 102 ntBASIC1.43□□□□□ -2.18
NEK3P51956 RNU6-702P-201ENST00000364982 107 ntBASIC1.43□□□□□ -2.18
NEK3P51956 RNU4-17P-201ENST00000365598 141 ntBASIC1.43□□□□□ -2.18
NEK3P51956 Y_RNA.452-201ENST00000384202 108 ntBASIC1.43□□□□□ -2.18
NEK3P51956 Y_RNA.537-201ENST00000384626 109 ntBASIC1.43□□□□□ -2.18
NEK3P51956 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms