Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
SHC1P29353 Y_RNA.272-201ENST00000364696 102 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNU6-728P-201ENST00000365375 104 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNU6-1130P-201ENST00000365434 107 ntBASIC1.35□□□□□ -2.19
SHC1P29353 Y_RNA.398-201ENST00000383952 99 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNY3P5-201ENST00000384127 102 ntBASIC1.35□□□□□ -2.19
SHC1P29353 MIR520A-201ENST00000384862 85 ntBASIC1.35□□□□□ -2.19
SHC1P29353 MIR15B-201ENST00000385045 98 ntBASIC1.35□□□□□ -2.19
SHC1P29353 MIR30A-201ENST00000385092 71 ntBASIC1.35□□□□□ -2.19
SHC1P29353 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
SHC1P29353 FTH1P12-201ENST00000432137 551 ntBASIC1.35□□□□□ -2.19
SHC1P29353 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.35□□□□□ -2.19
SHC1P29353 RNU7-149P-201ENST00000516739 59 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNU6-1116P-201ENST00000517269 99 ntBASIC1.35□□□□□ -2.19
SHC1P29353 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
SHC1P29353 Pinc.1-201ENST00000616452 154 ntBASIC1.35□□□□□ -2.19
SHC1P29353 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.35□□□□□ -2.19
SHC1P29353 MIRLET7C-201ENST00000362160 84 ntBASIC1.34□□□□□ -2.19
SHC1P29353 Y_RNA.265-201ENST00000364677 108 ntBASIC1.34□□□□□ -2.19
SHC1P29353 SNORD50B-201ENST00000364995 70 ntBASIC1.34□□□□□ -2.19
SHC1P29353 Y_RNA.486-201ENST00000384398 107 ntBASIC1.34□□□□□ -2.19
SHC1P29353 SNORD72-201ENST00000390994 80 ntBASIC1.34□□□□□ -2.19
SHC1P29353 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
SHC1P29353 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
SHC1P29353 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.34□□□□□ -2.19
SHC1P29353 SNORD77.4-201ENST00000516158 81 ntBASIC1.34□□□□□ -2.19
SHC1P29353 RNU7-121P-201ENST00000516604 62 ntBASIC1.34□□□□□ -2.19
SHC1P29353 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
SHC1P29353 MIR4762-201ENST00000585261 75 ntBASIC1.34□□□□□ -2.19
SHC1P29353 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
SHC1P29353 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.34□□□□□ -2.19
SHC1P29353 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SHC1P29353 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
SHC1P29353 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SHC1P29353 Y_RNA.91-201ENST00000363042 107 ntBASIC1.33□□□□□ -2.2
SHC1P29353 Y_RNA.357-201ENST00000365487 109 ntBASIC1.33□□□□□ -2.2
SHC1P29353 Y_RNA.506-201ENST00000384494 102 ntBASIC1.33□□□□□ -2.2
SHC1P29353 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
SHC1P29353 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHC1P29353 RNU4-43P-201ENST00000410628 137 ntBASIC1.33□□□□□ -2.2
SHC1P29353 RNU2-7P-201ENST00000410794 178 ntBASIC1.33□□□□□ -2.2
SHC1P29353 RNU2-55P-201ENST00000411146 174 ntBASIC1.33□□□□□ -2.2
SHC1P29353 AC006461.1-201ENST00000412637 326 ntBASIC1.33□□□□□ -2.2
SHC1P29353 AC069257.2-201ENST00000441819 155 ntBASIC1.33□□□□□ -2.2
SHC1P29353 STAG3L5P-204ENST00000443759 179 ntBASIC1.33□□□□□ -2.2
SHC1P29353 RNU6-346P-201ENST00000516288 111 ntBASIC1.33□□□□□ -2.2
SHC1P29353 RNU6-1299P-201ENST00000516316 100 ntBASIC1.33□□□□□ -2.2
SHC1P29353 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
SHC1P29353 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.33□□□□□ -2.2
SHC1P29353 AC008507.4-201ENST00000585464 127 ntBASIC1.33□□□□□ -2.2
SHC1P29353 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
SHC1P29353 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.32□□□□□ -2.2
SHC1P29353 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
SHC1P29353 U8.5-201ENST00000364528 136 ntBASIC1.32□□□□□ -2.2
SHC1P29353 Y_RNA.634-201ENST00000364811 113 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-1138P-201ENST00000365359 106 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-643P-201ENST00000384018 107 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-125P-201ENST00000384505 107 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-1031P-201ENST00000384773 107 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-239P-201ENST00000390990 99 ntBASIC1.32□□□□□ -2.2
SHC1P29353 Y_RNA.580-201ENST00000391004 95 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RN7SKP200-201ENST00000410564 320 ntBASIC1.32□□□□□ -2.2
SHC1P29353 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
SHC1P29353 AC005840.1-201ENST00000498412 377 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU6-970P-201ENST00000516312 107 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
SHC1P29353 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
SHC1P29353 MIR3658-201ENST00000636291 56 ntBASIC1.32□□□□□ -2.2
SHC1P29353 Y_RNA.432-201ENST00000384087 111 ntBASIC1.31□□□□□ -2.2
SHC1P29353 U8.16-201ENST00000391279 133 ntBASIC1.31□□□□□ -2.2
SHC1P29353 CALM2P4-201ENST00000430810 426 ntBASIC1.31□□□□□ -2.2
SHC1P29353 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.31□□□□□ -2.2
SHC1P29353 AC023449.1-201ENST00000454464 154 ntBASIC1.31□□□□□ -2.2
SHC1P29353 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
SHC1P29353 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
SHC1P29353 RNU7-200P-201ENST00000516105 62 ntBASIC1.31□□□□□ -2.2
SHC1P29353 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
SHC1P29353 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
SHC1P29353 RNU6-197P-201ENST00000516680 100 ntBASIC1.31□□□□□ -2.2
SHC1P29353 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
SHC1P29353 MIR3133-201ENST00000583157 78 ntBASIC1.31□□□□□ -2.2
SHC1P29353 AC021506.2-201ENST00000612354 169 ntBASIC1.31□□□□□ -2.2
SHC1P29353 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SHC1P29353 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHC1P29353 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHC1P29353 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
SHC1P29353 Y_RNA.66-201ENST00000362862 102 ntBASIC1.3□□□□□ -2.2
SHC1P29353 RNU6-187P-201ENST00000384139 106 ntBASIC1.3□□□□□ -2.2
SHC1P29353 RNU6-439P-201ENST00000384188 106 ntBASIC1.3□□□□□ -2.2
SHC1P29353 RNU6-424P-201ENST00000384367 105 ntBASIC1.3□□□□□ -2.2
SHC1P29353 RNU6-768P-201ENST00000384683 107 ntBASIC1.3□□□□□ -2.2
SHC1P29353 AL603908.1-201ENST00000406098 201 ntBASIC1.3□□□□□ -2.2
SHC1P29353 MIR548M-201ENST00000408260 86 ntBASIC1.3□□□□□ -2.2
SHC1P29353 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
SHC1P29353 SNRPGP14-201ENST00000435400 219 ntBASIC1.3□□□□□ -2.2
SHC1P29353 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.3□□□□□ -2.2
SHC1P29353 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms