Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PEX2P28328 RNU6-578P-201ENST00000390980 103 ntBASIC1.65□□□□□ -2.15
PEX2P28328 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
PEX2P28328 AL445685.2-201ENST00000422551 342 ntBASIC1.65□□□□□ -2.15
PEX2P28328 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PEX2P28328 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.65□□□□□ -2.15
PEX2P28328 Y_RNA.797-201ENST00000515977 94 ntBASIC1.65□□□□□ -2.15
PEX2P28328 Y_RNA.666-201ENST00000516187 112 ntBASIC1.65□□□□□ -2.15
PEX2P28328 SNORD111.1-201ENST00000516421 86 ntBASIC1.65□□□□□ -2.15
PEX2P28328 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
PEX2P28328 AL160236.1-201ENST00000556317 195 ntBASIC1.65□□□□□ -2.15
PEX2P28328 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PEX2P28328 RNU6-200P-201ENST00000364743 107 ntBASIC1.64□□□□□ -2.15
PEX2P28328 Y_RNA.297-201ENST00000364950 91 ntBASIC1.64□□□□□ -2.15
PEX2P28328 SNORD24-201ENST00000383884 75 ntBASIC1.64□□□□□ -2.15
PEX2P28328 RNU6-918P-201ENST00000391219 106 ntBASIC1.64□□□□□ -2.15
PEX2P28328 SNRPGP8-201ENST00000454064 226 ntBASIC1.64□□□□□ -2.15
PEX2P28328 RPL39P39-201ENST00000455840 151 ntBASIC1.64□□□□□ -2.15
PEX2P28328 SNORD123-201ENST00000459473 70 ntBASIC1.64□□□□□ -2.15
PEX2P28328 RNU7-43P-201ENST00000516554 64 ntBASIC1.64□□□□□ -2.15
PEX2P28328 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
PEX2P28328 AC109810.1-201ENST00000534066 224 ntBASIC1.64□□□□□ -2.15
PEX2P28328 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
PEX2P28328 MIR3945-201ENST00000581853 98 ntBASIC1.64□□□□□ -2.15
PEX2P28328 AC097639.2-201ENST00000603159 172 ntBASIC1.64□□□□□ -2.15
PEX2P28328 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
PEX2P28328 AC108706.1-201ENST00000611053 297 ntBASIC1.64□□□□□ -2.15
PEX2P28328 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
PEX2P28328 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PEX2P28328 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
PEX2P28328 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
PEX2P28328 Y_RNA.182-201ENST00000363880 111 ntBASIC1.63□□□□□ -2.15
PEX2P28328 Y_RNA.634-201ENST00000364811 113 ntBASIC1.63□□□□□ -2.15
PEX2P28328 RNU4-43P-201ENST00000410628 137 ntBASIC1.63□□□□□ -2.15
PEX2P28328 AL121914.1-201ENST00000450188 156 ntBASIC1.63□□□□□ -2.15
PEX2P28328 AL138752.1-201ENST00000452964 351 ntBASIC1.63□□□□□ -2.15
PEX2P28328 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
PEX2P28328 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.63□□□□□ -2.15
PEX2P28328 RNU7-25P-201ENST00000516544 62 ntBASIC1.63□□□□□ -2.15
PEX2P28328 RNU6-504P-201ENST00000516568 104 ntBASIC1.63□□□□□ -2.15
PEX2P28328 RNU6-197P-201ENST00000516680 100 ntBASIC1.63□□□□□ -2.15
PEX2P28328 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.63□□□□□ -2.15
PEX2P28328 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
PEX2P28328 Y_RNA.644-201ENST00000459006 113 ntBASIC1.62□□□□□ -2.15
PEX2P28328 RNU6-138P-201ENST00000515952 107 ntBASIC1.62□□□□□ -2.15
PEX2P28328 Y_RNA.674-201ENST00000516362 113 ntBASIC1.62□□□□□ -2.15
PEX2P28328 Y_RNA.700-201ENST00000516806 100 ntBASIC1.62□□□□□ -2.15
PEX2P28328 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.62□□□□□ -2.15
PEX2P28328 Y_RNA.91-201ENST00000363042 107 ntBASIC1.61□□□□□ -2.15
PEX2P28328 RNU6-275P-201ENST00000364910 107 ntBASIC1.61□□□□□ -2.15
PEX2P28328 Y_RNA.547-201ENST00000384654 119 ntBASIC1.61□□□□□ -2.15
PEX2P28328 U8.17-201ENST00000391292 132 ntBASIC1.61□□□□□ -2.15
PEX2P28328 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
PEX2P28328 RNU4-57P-201ENST00000515980 135 ntBASIC1.61□□□□□ -2.15
PEX2P28328 RNU6-693P-201ENST00000516134 107 ntBASIC1.61□□□□□ -2.15
PEX2P28328 RNU6-561P-201ENST00000516222 102 ntBASIC1.61□□□□□ -2.15
PEX2P28328 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
PEX2P28328 CYP3A52P-201ENST00000563326 91 ntBASIC1.61□□□□□ -2.15
PEX2P28328 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
PEX2P28328 Y_RNA.66-201ENST00000362862 102 ntBASIC1.6□□□□□ -2.15
PEX2P28328 Y_RNA.75-201ENST00000362927 97 ntBASIC1.6□□□□□ -2.15
PEX2P28328 RNU6-888P-201ENST00000363010 101 ntBASIC1.6□□□□□ -2.15
PEX2P28328 SNORA1.2-201ENST00000365189 134 ntBASIC1.6□□□□□ -2.15
PEX2P28328 RNU6-47P-201ENST00000383866 107 ntBASIC1.6□□□□□ -2.15
PEX2P28328 SNORD61-201ENST00000384252 73 ntBASIC1.6□□□□□ -2.15
PEX2P28328 MIR520C-201ENST00000385005 87 ntBASIC1.6□□□□□ -2.15
PEX2P28328 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.6□□□□□ -2.15
PEX2P28328 Y_RNA.793-201ENST00000411222 111 ntBASIC1.6□□□□□ -2.15
PEX2P28328 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
PEX2P28328 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
PEX2P28328 MIR6715A-201ENST00000615929 79 ntBASIC1.6□□□□□ -2.15
PEX2P28328 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
PEX2P28328 SNORD115-28-201ENST00000363931 81 ntBASIC1.59□□□□□ -2.15
PEX2P28328 snoU13.26-201ENST00000459452 105 ntBASIC1.59□□□□□ -2.15
PEX2P28328 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
PEX2P28328 RNU6-1270P-201ENST00000517128 108 ntBASIC1.59□□□□□ -2.15
PEX2P28328 MIR4764-201ENST00000580680 88 ntBASIC1.59□□□□□ -2.15
PEX2P28328 AC104984.5-201ENST00000586878 94 ntBASIC1.59□□□□□ -2.15
PEX2P28328 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
PEX2P28328 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PEX2P28328 Y_RNA.233-201ENST00000364407 101 ntBASIC1.58□□□□□ -2.16
PEX2P28328 Y_RNA.412-201ENST00000384001 104 ntBASIC1.58□□□□□ -2.16
PEX2P28328 MIR518F-201ENST00000384973 87 ntBASIC1.58□□□□□ -2.16
PEX2P28328 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.58□□□□□ -2.16
PEX2P28328 AC087499.4-201ENST00000448505 178 ntBASIC1.58□□□□□ -2.16
PEX2P28328 AC107393.1-201ENST00000512403 346 ntBASIC1.58□□□□□ -2.16
PEX2P28328 AC007751.1-201ENST00000529260 376 ntBASIC1.58□□□□□ -2.16
PEX2P28328 MRPS18CP4-201ENST00000535821 231 ntBASIC1.58□□□□□ -2.16
PEX2P28328 AC072026.1-201ENST00000605023 201 ntBASIC1.58□□□□□ -2.16
PEX2P28328 MIR8065-201ENST00000620577 100 ntBASIC1.58□□□□□ -2.16
PEX2P28328 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.58□□□□□ -2.16
PEX2P28328 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.58□□□□□ -2.16
PEX2P28328 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PEX2P28328 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
PEX2P28328 RNU6-1067P-201ENST00000384752 107 ntBASIC1.57□□□□□ -2.16
PEX2P28328 MIR548A2-201ENST00000384956 97 ntBASIC1.57□□□□□ -2.16
PEX2P28328 MIR9-3-201ENST00000385084 90 ntBASIC1.57□□□□□ -2.16
PEX2P28328 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.57□□□□□ -2.16
PEX2P28328 RNA5SP182-201ENST00000516064 82 ntBASIC1.57□□□□□ -2.16
PEX2P28328 RNU1-41P-201ENST00000516161 162 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms