Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR136-201ENST00000385207 82 ntBASIC2.03□□□□□ -2.08
CD40P25942 SNORA40-201ENST00000388090 126 ntBASIC2.03□□□□□ -2.08
CD40P25942 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CD40P25942 Y_RNA.586-201ENST00000391146 98 ntBASIC2.03□□□□□ -2.08
CD40P25942 MIR1267-201ENST00000408723 78 ntBASIC2.03□□□□□ -2.08
CD40P25942 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
CD40P25942 Z98742.3-201ENST00000418637 326 ntBASIC2.03□□□□□ -2.08
CD40P25942 MTND4LP9-201ENST00000427694 174 ntBASIC2.03□□□□□ -2.08
CD40P25942 RNU4-57P-201ENST00000515980 135 ntBASIC2.03□□□□□ -2.08
CD40P25942 SNORD36C-201ENST00000516733 66 ntBASIC2.03□□□□□ -2.08
CD40P25942 AP001328.1-201ENST00000528550 176 ntBASIC2.03□□□□□ -2.08
CD40P25942 MIR376A2-201ENST00000636782 80 ntBASIC2.03□□□□□ -2.08
CD40P25942 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CD40P25942 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
CD40P25942 AL157777.2-201ENST00000258070 137 ntBASIC2.02□□□□□ -2.09
CD40P25942 RNU6-1189P-201ENST00000383958 107 ntBASIC2.02□□□□□ -2.09
CD40P25942 Y_RNA.410-201ENST00000383992 113 ntBASIC2.02□□□□□ -2.09
CD40P25942 MIR144-201ENST00000384886 86 ntBASIC2.02□□□□□ -2.09
CD40P25942 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CD40P25942 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
CD40P25942 RNU6-830P-201ENST00000516353 107 ntBASIC2.02□□□□□ -2.09
CD40P25942 MIR5007-201ENST00000583098 95 ntBASIC2.02□□□□□ -2.09
CD40P25942 FAM106DP-201ENST00000586416 501 ntBASIC2.02□□□□□ -2.09
CD40P25942 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CD40P25942 MTND5P32-201ENST00000560711 1802 ntBASIC2.01□□□□□ -2.09
CD40P25942 MIR6073-201ENST00000352083 89 ntBASIC2.01□□□□□ -2.09
CD40P25942 U8.2-201ENST00000363156 134 ntBASIC2.01□□□□□ -2.09
CD40P25942 RNU6-938P-201ENST00000411285 103 ntBASIC2.01□□□□□ -2.09
CD40P25942 AL161935.2-201ENST00000414627 60 ntBASIC2.01□□□□□ -2.09
CD40P25942 Y_RNA.686-201ENST00000516548 134 ntBASIC2.01□□□□□ -2.09
CD40P25942 RNU7-181P-201ENST00000517234 74 ntBASIC2.01□□□□□ -2.09
CD40P25942 AP003484.1-201ENST00000530974 250 ntBASIC2.01□□□□□ -2.09
CD40P25942 MIR5694-201ENST00000581190 76 ntBASIC2.01□□□□□ -2.09
CD40P25942 MIR5197-201ENST00000583721 112 ntBASIC2.01□□□□□ -2.09
CD40P25942 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
CD40P25942 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CD40P25942 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
CD40P25942 RNA5SP259-201ENST00000365541 109 ntBASIC2□□□□□ -2.09
CD40P25942 SNORA19-201ENST00000384737 128 ntBASIC2□□□□□ -2.09
CD40P25942 MIR513A1-201ENST00000385138 129 ntBASIC2□□□□□ -2.09
CD40P25942 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2□□□□□ -2.09
CD40P25942 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
CD40P25942 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
CD40P25942 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2□□□□□ -2.09
CD40P25942 AC087499.4-201ENST00000448505 178 ntBASIC2□□□□□ -2.09
CD40P25942 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2□□□□□ -2.09
CD40P25942 AP001340.1-201ENST00000624405 217 ntBASIC2□□□□□ -2.09
CD40P25942 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
CD40P25942 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CD40P25942 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
CD40P25942 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD40P25942 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.99□□□□□ -2.09
CD40P25942 Y_RNA.241-201ENST00000364470 117 ntBASIC1.99□□□□□ -2.09
CD40P25942 SNORD18B-201ENST00000365659 72 ntBASIC1.99□□□□□ -2.09
CD40P25942 U8.17-201ENST00000391292 132 ntBASIC1.99□□□□□ -2.09
CD40P25942 RNU1-41P-201ENST00000516161 162 ntBASIC1.99□□□□□ -2.09
CD40P25942 RNU6-917P-201ENST00000516294 104 ntBASIC1.99□□□□□ -2.09
CD40P25942 RNU1-48P-201ENST00000516400 162 ntBASIC1.99□□□□□ -2.09
CD40P25942 RNU6-1149P-201ENST00000516810 97 ntBASIC1.99□□□□□ -2.09
CD40P25942 SNORA18.7-201ENST00000516910 131 ntBASIC1.99□□□□□ -2.09
CD40P25942 RNU2-60P-201ENST00000517290 128 ntBASIC1.99□□□□□ -2.09
CD40P25942 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
CD40P25942 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.99□□□□□ -2.09
CD40P25942 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CD40P25942 MIR21-201ENST00000362134 72 ntBASIC1.98□□□□□ -2.09
CD40P25942 Y_RNA.120-201ENST00000363304 110 ntBASIC1.98□□□□□ -2.09
CD40P25942 SNORA2.2-201ENST00000365473 135 ntBASIC1.98□□□□□ -2.09
CD40P25942 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
CD40P25942 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
CD40P25942 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
CD40P25942 MIR1273D-201ENST00000577266 86 ntBASIC1.98□□□□□ -2.09
CD40P25942 SNORA77B-201ENST00000578179 125 ntBASIC1.98□□□□□ -2.09
CD40P25942 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
CD40P25942 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
CD40P25942 AC011603.4-201ENST00000611325 277 ntBASIC1.98□□□□□ -2.09
CD40P25942 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
CD40P25942 U2.22-201ENST00000636441 106 ntBASIC1.98□□□□□ -2.09
CD40P25942 AL442644.1-201ENST00000454390 3105 ntBASIC1.98□□□□□ -2.09
CD40P25942 RNU6-81P-201ENST00000365608 104 ntBASIC1.97□□□□□ -2.09
CD40P25942 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
CD40P25942 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
CD40P25942 SNORD123-201ENST00000459473 70 ntBASIC1.97□□□□□ -2.09
CD40P25942 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
CD40P25942 Y_RNA.690-201ENST00000516603 95 ntBASIC1.97□□□□□ -2.09
CD40P25942 SCARNA15-202ENST00000516881 127 ntBASIC1.97□□□□□ -2.09
CD40P25942 RNU6-971P-201ENST00000516920 106 ntBASIC1.97□□□□□ -2.09
CD40P25942 U7.2-201ENST00000607576 63 ntBASIC1.97□□□□□ -2.09
CD40P25942 TUG1_4.1-201ENST00000619464 181 ntBASIC1.97□□□□□ -2.09
CD40P25942 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
CD40P25942 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
CD40P25942 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD40P25942 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CD40P25942 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
CD40P25942 RNU6-508P-201ENST00000363231 103 ntBASIC1.96□□□□□ -2.1
CD40P25942 Y_RNA.440-201ENST00000384120 114 ntBASIC1.96□□□□□ -2.1
CD40P25942 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CD40P25942 MIR1261-201ENST00000408659 82 ntBASIC1.96□□□□□ -2.1
CD40P25942 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.96□□□□□ -2.1
CD40P25942 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CD40P25942 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms