Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MIR4762-201ENST00000585261 75 ntBASIC0.53□□□□□ -2.32
COL5A3P25940 AL591926.4-201ENST00000616895 298 ntBASIC0.53□□□□□ -2.32
COL5A3P25940 AC134026.1-201ENST00000623249 2239 ntBASIC0.53□□□□□ -2.32
COL5A3P25940 SNORD113-8-201ENST00000363497 74 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.170-201ENST00000363746 110 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU4-67P-201ENST00000364569 141 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-1065P-201ENST00000384513 106 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 SNORA12.1-201ENST00000390873 148 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-131P-201ENST00000391144 107 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AL451046.2-201ENST00000403074 277 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 CALM2P4-201ENST00000430810 426 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.52□□□□□ -2.33
COL5A3P25940 STAG3L5P-204ENST00000443759 179 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.639-201ENST00000458981 102 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC098869.1-201ENST00000481627 292 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC114811.1-201ENST00000507207 168 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNY3P15-201ENST00000516297 97 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU7-40P-201ENST00000516397 64 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU7-116P-201ENST00000516940 62 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-897P-201ENST00000517135 105 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC020661.2-201ENST00000560114 134 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC136932.1-201ENST00000574771 208 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AP003357.1-201ENST00000604497 148 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 MIR376A1-201ENST00000616574 68 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNA5SP327-201ENST00000362494 101 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.64-201ENST00000362845 102 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 snoU2-30.1-201ENST00000365012 70 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 SNORA2.2-201ENST00000365473 135 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-1323P-201ENST00000384025 107 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.526-201ENST00000384572 110 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 MIR19B1-201ENST00000384829 87 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.602-201ENST00000410535 92 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 MIR1468-201ENST00000410600 86 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU2-14P-201ENST00000411053 191 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 HSPE1P25-201ENST00000455484 251 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AL133373.1-201ENST00000497098 94 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-1153P-201ENST00000516760 105 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Y_RNA.700-201ENST00000516806 100 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 RNU6-988P-201ENST00000519081 107 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AL442663.2-201ENST00000554385 511 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 MIR4778-201ENST00000577635 80 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC015688.6-201ENST00000577737 104 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 MIR548AR-201ENST00000582191 57 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC104695.3-201ENST00000604052 296 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AL022345.2-201ENST00000606307 135 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 Pinc.1-201ENST00000616452 154 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 AC068647.2-201ENST00000637380 353 ntBASIC0.52□□□□□ -2.33
COL5A3P25940 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
COL5A3P25940 RNU4-90P-201ENST00000362773 141 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 SNORA72-201ENST00000384339 132 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 MIR522-201ENST00000385071 87 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6-910P-201ENST00000390844 107 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 MIR548P-201ENST00000408336 84 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6-121P-201ENST00000410525 99 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 Y_RNA.621-201ENST00000411065 96 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 AC245047.7-201ENST00000440265 293 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.51□□□□□ -2.33
COL5A3P25940 RPL39P39-201ENST00000455840 151 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6-397P-201ENST00000516226 104 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6-917P-201ENST00000516294 104 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 RNU6-1338P-201ENST00000516328 91 ntBASIC0.51□□□□□ -2.33
COL5A3P25940 Y_RNA.158-201ENST00000363651 101 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 SNORA33.2-201ENST00000365413 134 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.370-201ENST00000365589 108 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.394-201ENST00000383942 103 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-144P-201ENST00000383951 107 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.572-201ENST00000384757 98 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR526A1-201ENST00000384897 85 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR520C-201ENST00000385005 87 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COL5A3P25940 SNORA53-201ENST00000391141 249 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-985P-201ENST00000410182 104 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-855P-201ENST00000410395 104 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 SNORA36B-201ENST00000410438 131 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 SNRPGP10-201ENST00000432323 225 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.5□□□□□ -2.33
COL5A3P25940 U8.19-201ENST00000459095 133 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU7-141P-201ENST00000459304 62 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RPS26P48-201ENST00000491713 339 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-475P-201ENST00000516073 104 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 SNORD45.4-201ENST00000516629 73 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-922P-201ENST00000516753 99 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC024405.2-202ENST00000532731 184 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.5□□□□□ -2.33
COL5A3P25940 MIR3192-201ENST00000584920 77 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AL357312.1-201ENST00000603879 298 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 BX284668.6-201ENST00000606899 438 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 PART1_1.1-201ENST00000611761 217 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 JPX_2.1-201ENST00000614161 69 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC013791.1-201ENST00000616619 62 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC073349.3-201ENST00000617616 186 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-674P-201ENST00000363831 107 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-1048P-201ENST00000364054 107 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.216-201ENST00000364205 93 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms