Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SNORD115-2-201ENST00000362842 82 ntBASIC2.92□□□□□ -1.94
NID1P14543 RNU6-776P-201ENST00000364403 104 ntBASIC2.92□□□□□ -1.94
NID1P14543 SNORA1.1-201ENST00000364671 133 ntBASIC2.92□□□□□ -1.94
NID1P14543 RNU6-1022P-201ENST00000365049 104 ntBASIC2.92□□□□□ -1.94
NID1P14543 SNORD115-20-201ENST00000365099 82 ntBASIC2.92□□□□□ -1.94
NID1P14543 Y_RNA.494-201ENST00000384432 111 ntBASIC2.92□□□□□ -1.94
NID1P14543 MIR5004-201ENST00000579078 107 ntBASIC2.92□□□□□ -1.94
NID1P14543 MIR4325-201ENST00000583049 90 ntBASIC2.92□□□□□ -1.94
NID1P14543 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.92□□□□□ -1.94
NID1P14543 AC245060.5-201ENST00000610778 3293 ntBASIC2.91□□□□□ -1.94
NID1P14543 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
NID1P14543 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
NID1P14543 RNU6-1313P-201ENST00000362622 102 ntBASIC2.91□□□□□ -1.94
NID1P14543 MIR1267-201ENST00000408723 78 ntBASIC2.91□□□□□ -1.94
NID1P14543 AL606517.2-201ENST00000442855 241 ntBASIC2.91□□□□□ -1.94
NID1P14543 AC092185.1-201ENST00000491371 97 ntBASIC2.91□□□□□ -1.94
NID1P14543 RNA5SP33-201ENST00000516687 98 ntBASIC2.91□□□□□ -1.94
NID1P14543 RPPH1-2P-201ENST00000516688 293 ntBASIC2.91□□□□□ -1.94
NID1P14543 AC245166.1-201ENST00000521012 253 ntBASIC2.91□□□□□ -1.94
NID1P14543 MIR3152-201ENST00000579801 74 ntBASIC2.91□□□□□ -1.94
NID1P14543 MIR548AE2-201ENST00000583456 67 ntBASIC2.91□□□□□ -1.94
NID1P14543 AC006160.2-201ENST00000637708 154 ntBASIC2.91□□□□□ -1.94
NID1P14543 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.91□□□□□ -1.94
NID1P14543 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NID1P14543 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NID1P14543 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NID1P14543 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NID1P14543 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NID1P14543 Y_RNA.4-201ENST00000362333 112 ntBASIC2.9□□□□□ -1.95
NID1P14543 SNORA68.1-201ENST00000364537 132 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-652P-201ENST00000365488 107 ntBASIC2.9□□□□□ -1.95
NID1P14543 SNORD58A-201ENST00000383875 65 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-1319P-201ENST00000390855 104 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-747P-201ENST00000390928 104 ntBASIC2.9□□□□□ -1.95
NID1P14543 U8.15-201ENST00000390947 134 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-241P-201ENST00000391148 104 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU4-47P-201ENST00000410876 114 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-177P-201ENST00000411257 104 ntBASIC2.9□□□□□ -1.95
NID1P14543 STAG3L5P-204ENST00000443759 179 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU7-45P-201ENST00000459460 63 ntBASIC2.9□□□□□ -1.95
NID1P14543 UBL5P3-201ENST00000475112 231 ntBASIC2.9□□□□□ -1.95
NID1P14543 AC018868.1-201ENST00000491307 315 ntBASIC2.9□□□□□ -1.95
NID1P14543 RNU6-1258P-201ENST00000516911 111 ntBASIC2.9□□□□□ -1.95
NID1P14543 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NID1P14543 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NID1P14543 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
NID1P14543 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NID1P14543 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
NID1P14543 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
NID1P14543 Y_RNA.430-201ENST00000384081 110 ntBASIC2.89□□□□□ -1.95
NID1P14543 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
NID1P14543 RNU6-1072P-201ENST00000384703 107 ntBASIC2.89□□□□□ -1.95
NID1P14543 RNU6-443P-201ENST00000384780 107 ntBASIC2.89□□□□□ -1.95
NID1P14543 MIR1289-1-201ENST00000408836 144 ntBASIC2.89□□□□□ -1.95
NID1P14543 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.89□□□□□ -1.95
NID1P14543 RNU7-181P-201ENST00000517234 74 ntBASIC2.89□□□□□ -1.95
NID1P14543 RNU6-1116P-201ENST00000517269 99 ntBASIC2.89□□□□□ -1.95
NID1P14543 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
NID1P14543 SNORA28-201ENST00000606769 126 ntBASIC2.89□□□□□ -1.95
NID1P14543 AC027279.3-201ENST00000625055 122 ntBASIC2.89□□□□□ -1.95
NID1P14543 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NID1P14543 SNORA22.1-201ENST00000362701 134 ntBASIC2.88□□□□□ -1.95
NID1P14543 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
NID1P14543 Y_RNA.470-201ENST00000384307 117 ntBASIC2.88□□□□□ -1.95
NID1P14543 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
NID1P14543 AC015922.2-201ENST00000435593 184 ntBASIC2.88□□□□□ -1.95
NID1P14543 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.88□□□□□ -1.95
NID1P14543 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
NID1P14543 AC108729.3-201ENST00000513484 108 ntBASIC2.88□□□□□ -1.95
NID1P14543 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.88□□□□□ -1.95
NID1P14543 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.88□□□□□ -1.95
NID1P14543 MIR548BB-201ENST00000626714 66 ntBASIC2.88□□□□□ -1.95
NID1P14543 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NID1P14543 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
NID1P14543 SNORA25B-201ENST00000365507 128 ntBASIC2.87□□□□□ -1.95
NID1P14543 RNA5SP109-201ENST00000391010 116 ntBASIC2.87□□□□□ -1.95
NID1P14543 Y_RNA.607-201ENST00000410597 98 ntBASIC2.87□□□□□ -1.95
NID1P14543 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.87□□□□□ -1.95
NID1P14543 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.87□□□□□ -1.95
NID1P14543 AC069257.2-201ENST00000441819 155 ntBASIC2.87□□□□□ -1.95
NID1P14543 AC139453.2-201ENST00000487255 133 ntBASIC2.87□□□□□ -1.95
NID1P14543 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.87□□□□□ -1.95
NID1P14543 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.87□□□□□ -1.95
NID1P14543 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NID1P14543 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.87□□□□□ -1.95
NID1P14543 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NID1P14543 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NID1P14543 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
NID1P14543 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NID1P14543 RNU6-509P-201ENST00000363519 107 ntBASIC2.86□□□□□ -1.95
NID1P14543 Y_RNA.191-201ENST00000363972 113 ntBASIC2.86□□□□□ -1.95
NID1P14543 SNORA1.2-201ENST00000365189 134 ntBASIC2.86□□□□□ -1.95
NID1P14543 SNORA70.7-201ENST00000384159 133 ntBASIC2.86□□□□□ -1.95
NID1P14543 RNA5SP261-201ENST00000410536 106 ntBASIC2.86□□□□□ -1.95
NID1P14543 MIR1270-201ENST00000459320 83 ntBASIC2.86□□□□□ -1.95
NID1P14543 RN7SL863P-201ENST00000462370 296 ntBASIC2.86□□□□□ -1.95
NID1P14543 AC103810.6-201ENST00000606708 136 ntBASIC2.86□□□□□ -1.95
NID1P14543 MIR376B-201ENST00000614515 100 ntBASIC2.86□□□□□ -1.95
NID1P14543 MIR8054-201ENST00000620877 86 ntBASIC2.86□□□□□ -1.95
NID1P14543 MIR6841-201ENST00000637129 72 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms