Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.66□□□□□ -2.83
VCANP13611 SNORA1.2-201ENST00000365189 134 ntBASIC-2.66□□□□□ -2.83
VCANP13611 AC117522.1-201ENST00000509821 380 ntBASIC-2.66□□□□□ -2.83
VCANP13611 MIR6773-201ENST00000612812 74 ntBASIC-2.66□□□□□ -2.83
VCANP13611 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.66□□□□□ -2.84
VCANP13611 RNU6-291P-201ENST00000384720 107 ntBASIC-2.66□□□□□ -2.84
VCANP13611 AP000542.1-201ENST00000448473 371 ntBASIC-2.66□□□□□ -2.84
VCANP13611 AC010608.3-201ENST00000625048 527 ntBASIC-2.66□□□□□ -2.84
VCANP13611 RNU6-697P-201ENST00000363348 107 ntBASIC-2.66□□□□□ -2.84
VCANP13611 Y_RNA.576-201ENST00000384781 102 ntBASIC-2.66□□□□□ -2.84
VCANP13611 RNA5SP390-201ENST00000410191 113 ntBASIC-2.66□□□□□ -2.84
VCANP13611 RNU2-56P-201ENST00000516826 190 ntBASIC-2.66□□□□□ -2.84
VCANP13611 AC007012.1-201ENST00000567192 175 ntBASIC-2.66□□□□□ -2.84
VCANP13611 MTND4P3-201ENST00000417829 541 ntBASIC-2.67□□□□□ -2.84
VCANP13611 U8.22-201ENST00000459141 133 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNY3P13-201ENST00000365542 102 ntBASIC-2.67□□□□□ -2.84
VCANP13611 MIR570-201ENST00000384917 97 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNU6-337P-201ENST00000391243 106 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNU6-861P-201ENST00000516745 106 ntBASIC-2.67□□□□□ -2.84
VCANP13611 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-2.67□□□□□ -2.84
VCANP13611 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNU6-386P-201ENST00000362650 107 ntBASIC-2.67□□□□□ -2.84
VCANP13611 AL031274.1-201ENST00000450334 232 ntBASIC-2.67□□□□□ -2.84
VCANP13611 HSPE1P25-201ENST00000455484 251 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNU6-488P-201ENST00000515918 99 ntBASIC-2.67□□□□□ -2.84
VCANP13611 RNU6-137P-201ENST00000363680 108 ntBASIC-2.68□□□□□ -2.84
VCANP13611 RNU6-441P-201ENST00000384545 106 ntBASIC-2.68□□□□□ -2.84
VCANP13611 SNORD19-201ENST00000391191 68 ntBASIC-2.68□□□□□ -2.84
VCANP13611 SNORA40C-201ENST00000391285 128 ntBASIC-2.68□□□□□ -2.84
VCANP13611 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.68□□□□□ -2.84
VCANP13611 MTCYBP33-201ENST00000575007 1130 ntBASIC-2.68□□□□□ -2.84
VCANP13611 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.68□□□□□ -2.84
VCANP13611 CCDC58P2-201ENST00000417131 366 ntBASIC-2.68□□□□□ -2.84
VCANP13611 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.69□□□□□ -2.84
VCANP13611 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.69□□□□□ -2.84
VCANP13611 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.69□□□□□ -2.84
VCANP13611 SNORD28B-201ENST00000390993 75 ntBASIC-2.69□□□□□ -2.84
VCANP13611 Y_RNA.46-201ENST00000362695 102 ntBASIC-2.69□□□□□ -2.84
VCANP13611 RNU6-571P-201ENST00000384128 107 ntBASIC-2.69□□□□□ -2.84
VCANP13611 AC097510.1-201ENST00000510945 133 ntBASIC-2.69□□□□□ -2.84
VCANP13611 RNU7-128P-201ENST00000517247 62 ntBASIC-2.69□□□□□ -2.84
VCANP13611 AC104458.1-201ENST00000608243 463 ntBASIC-2.69□□□□□ -2.84
VCANP13611 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.69□□□□□ -2.84
VCANP13611 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-2.69□□□□□ -2.84
VCANP13611 MTND3P5-201ENST00000512798 333 ntBASIC-2.7□□□□□ -2.84
VCANP13611 RNU7-99P-201ENST00000516271 62 ntBASIC-2.7□□□□□ -2.84
VCANP13611 AC025647.1-201ENST00000517879 253 ntBASIC-2.7□□□□□ -2.84
VCANP13611 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.7□□□□□ -2.84
VCANP13611 AL390729.2-201ENST00000416137 156 ntBASIC-2.7□□□□□ -2.84
VCANP13611 MTND2P22-201ENST00000444325 1033 ntBASIC-2.7□□□□□ -2.84
VCANP13611 Y_RNA.148-201ENST00000363557 117 ntBASIC-2.7□□□□□ -2.84
VCANP13611 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.7□□□□□ -2.84
VCANP13611 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.7□□□□□ -2.84
VCANP13611 AC112206.4-201ENST00000515142 405 ntBASIC-2.7□□□□□ -2.84
VCANP13611 SNORD116-20-201ENST00000384529 92 ntBASIC-2.71□□□□□ -2.84
VCANP13611 MIR649-201ENST00000384843 97 ntBASIC-2.71□□□□□ -2.84
VCANP13611 MIR562-201ENST00000384894 95 ntBASIC-2.71□□□□□ -2.84
VCANP13611 MTATP6P19-201ENST00000413797 659 ntBASIC-2.71□□□□□ -2.84
VCANP13611 RMST_10.1-201ENST00000616309 154 ntBASIC-2.71□□□□□ -2.84
VCANP13611 MTCYBP39-201ENST00000437562 491 ntBASIC-2.71□□□□□ -2.84
VCANP13611 Z98949.2-201ENST00000440996 144 ntBASIC-2.71□□□□□ -2.84
VCANP13611 snoU109.3-201ENST00000459477 145 ntBASIC-2.71□□□□□ -2.84
VCANP13611 CPDP1-201ENST00000579660 283 ntBASIC-2.71□□□□□ -2.84
VCANP13611 MIR4491-201ENST00000581087 68 ntBASIC-2.71□□□□□ -2.84
VCANP13611 SNORD115-37-201ENST00000363768 82 ntBASIC-2.72□□□□□ -2.84
VCANP13611 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-2.72□□□□□ -2.84
VCANP13611 AC093423.1-201ENST00000440817 142 ntBASIC-2.72□□□□□ -2.84
VCANP13611 AC020550.1-201ENST00000447385 163 ntBASIC-2.72□□□□□ -2.84
VCANP13611 USP9YP28-201ENST00000435142 589 ntBASIC-2.72□□□□□ -2.85
VCANP13611 AC145350.1-201ENST00000567426 208 ntBASIC-2.72□□□□□ -2.85
VCANP13611 MIR23C-201ENST00000579846 100 ntBASIC-2.72□□□□□ -2.85
VCANP13611 RMST_5.1-201ENST00000618704 126 ntBASIC-2.72□□□□□ -2.85
VCANP13611 TPTEP1-208ENST00000636884 213 ntBASIC-2.72□□□□□ -2.85
VCANP13611 RNU6-774P-201ENST00000363238 107 ntBASIC-2.73□□□□□ -2.85
VCANP13611 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.73□□□□□ -2.85
VCANP13611 RNU6-429P-201ENST00000384582 108 ntBASIC-2.73□□□□□ -2.85
VCANP13611 SNORD73A-201ENST00000386062 65 ntBASIC-2.73□□□□□ -2.85
VCANP13611 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.73□□□□□ -2.85
VCANP13611 AC011374.2-201ENST00000607135 526 ntBASIC-2.73□□□□□ -2.85
VCANP13611 MIR30D-201ENST00000362283 70 ntBASIC-2.74□□□□□ -2.85
VCANP13611 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.74□□□□□ -2.85
VCANP13611 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.74□□□□□ -2.85
VCANP13611 MTCO1P57-201ENST00000432182 261 ntBASIC-2.74□□□□□ -2.85
VCANP13611 RNU6-142P-201ENST00000384019 107 ntBASIC-2.74□□□□□ -2.85
VCANP13611 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.74□□□□□ -2.85
VCANP13611 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-2.74□□□□□ -2.85
VCANP13611 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.74□□□□□ -2.85
VCANP13611 Y_RNA.267-201ENST00000364679 109 ntBASIC-2.75□□□□□ -2.85
VCANP13611 RNU6-737P-201ENST00000365370 107 ntBASIC-2.75□□□□□ -2.85
VCANP13611 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.75□□□□□ -2.85
VCANP13611 MIR1283-1-201ENST00000408494 87 ntBASIC-2.75□□□□□ -2.85
VCANP13611 AC113618.1-201ENST00000416747 285 ntBASIC-2.75□□□□□ -2.85
VCANP13611 AC074290.1-201ENST00000448883 135 ntBASIC-2.75□□□□□ -2.85
VCANP13611 RNU7-13P-201ENST00000516413 62 ntBASIC-2.75□□□□□ -2.85
VCANP13611 RPL30P16-201ENST00000419341 429 ntBASIC-2.75□□□□□ -2.85
VCANP13611 SNORD115-8-201ENST00000363856 82 ntBASIC-2.75□□□□□ -2.85
VCANP13611 RNU6-102P-201ENST00000384485 104 ntBASIC-2.75□□□□□ -2.85
VCANP13611 RNU6-855P-201ENST00000410395 104 ntBASIC-2.75□□□□□ -2.85
VCANP13611 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.75□□□□□ -2.85
VCANP13611 snoU13.8-201ENST00000458890 104 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms