Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC022523.2-201ENST00000561045 150 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD8P13378 Y_RNA.241-201ENST00000364470 117 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 Y_RNA.344-201ENST00000365381 112 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 RNU6-49P-201ENST00000384256 107 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 SNORA19.1-201ENST00000410656 129 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 snoU13.15-201ENST00000459407 104 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 AC114811.1-201ENST00000507207 168 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 RNU7-6P-201ENST00000516845 62 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD8P13378 SNORA28-201ENST00000606769 126 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 AL449363.1-201ENST00000617815 186 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 AC025521.1-201ENST00000621624 286 ntBASIC2.96□□□□□ -1.94
HOXD8P13378 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD8P13378 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD8P13378 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD8P13378 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD8P13378 Y_RNA.78-201ENST00000362970 110 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 RNU6-424P-201ENST00000384367 105 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 AL627390.1-201ENST00000396055 340 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 RNU6-938P-201ENST00000411285 103 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 AL035398.1-201ENST00000430869 322 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 SNRPGP14-201ENST00000435400 219 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 AL606517.2-201ENST00000442855 241 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 SNORA9.3-201ENST00000516383 129 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 RNU6-762P-201ENST00000517107 102 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 U4atac.1-201ENST00000618345 95 ntBASIC2.95□□□□□ -1.94
HOXD8P13378 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD8P13378 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD8P13378 RNU1-91P-201ENST00000364746 163 ntBASIC2.94□□□□□ -1.94
HOXD8P13378 MT-TI-201ENST00000387365 69 ntBASIC2.94□□□□□ -1.94
HOXD8P13378 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD8P13378 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD8P13378 AL603825.1-201ENST00000438481 80 ntBASIC2.94□□□□□ -1.94
HOXD8P13378 AL442128.1-201ENST00000615151 90 ntBASIC2.94□□□□□ -1.94
HOXD8P13378 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.94□□□□□ -1.94
HOXD8P13378 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD8P13378 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD8P13378 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD8P13378 RNU6-1104P-201ENST00000384723 104 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 MIR450A2-201ENST00000385022 100 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 RN7SKP200-201ENST00000410564 320 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 AL445687.1-201ENST00000439946 251 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXD8P13378 Y_RNA.676-201ENST00000516393 96 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 RNU6-1116P-201ENST00000517269 99 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD8P13378 MIR3169-201ENST00000578032 83 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 AC002984.1-201ENST00000591692 448 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 HSPE1P19-201ENST00000603327 295 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 AC069114.2-201ENST00000604699 304 ntBASIC2.93□□□□□ -1.94
HOXD8P13378 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
HOXD8P13378 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXD8P13378 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXD8P13378 SNORA27-201ENST00000384323 126 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 RNU6-816P-201ENST00000390914 107 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 RNU6-1268P-201ENST00000391214 107 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 RNU6-1239P-201ENST00000391310 107 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 RN7SKP123-201ENST00000410732 291 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 RNA5SP385-201ENST00000515947 110 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 MIR3683-201ENST00000580847 82 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 AC078899.2-201ENST00000595282 212 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 MIR8054-201ENST00000620877 86 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 AL162726.3-218ENST00000636401 95 ntBASIC2.92□□□□□ -1.94
HOXD8P13378 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HOXD8P13378 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 RNU4-36P-201ENST00000364294 144 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 MIR1912-201ENST00000410389 80 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 AL022718.1-201ENST00000412004 84 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD8P13378 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 AC109327.2-201ENST00000448339 378 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 AC008413.1-201ENST00000511864 177 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 RN7SKP12-201ENST00000516275 143 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 RNU2-35P-201ENST00000516446 142 ntBASIC2.91□□□□□ -1.94
HOXD8P13378 AC093908.1-201ENST00000623125 8092 ntBASIC2.9□□□□□ -1.94
HOXD8P13378 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXD8P13378 Y_RNA.219-201ENST00000364232 113 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 RNA5SP173-201ENST00000364857 136 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXD8P13378 RNA5SP320-201ENST00000516263 124 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 AC090821.2-201ENST00000523552 176 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 MIR4635-201ENST00000583759 79 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXD8P13378 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HOXD8P13378 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
HOXD8P13378 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXD8P13378 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXD8P13378 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXD8P13378 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXD8P13378 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXD8P13378 Y_RNA.107-201ENST00000363190 121 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms