Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-926P-201ENST00000384075 107 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-937P-201ENST00000384325 106 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 SNORA72-201ENST00000384339 132 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-163P-201ENST00000384396 106 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 SNORA12.1-201ENST00000390873 148 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC024067.1-201ENST00000426199 223 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 STAG3L5P-204ENST00000443759 179 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU7-141P-201ENST00000459304 62 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.52□□□□□ -2.33
COL11A1P12107 RNU4-57P-201ENST00000515980 135 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-947P-201ENST00000516264 106 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-1007P-201ENST00000516586 107 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU2-56P-201ENST00000516826 190 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-897P-201ENST00000517135 105 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC131281.1-201ENST00000522984 164 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.52□□□□□ -2.33
COL11A1P12107 MIR5589-201ENST00000579442 60 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC022140.2-201ENST00000623500 188 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 SNORD3E-202ENST00000627253 216 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 MIR335-201ENST00000362173 94 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC117470.1-201ENST00000381974 330 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 Y_RNA.394-201ENST00000383942 103 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-1227P-201ENST00000383981 107 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-1160P-201ENST00000384546 104 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 MIR526A1-201ENST00000384897 85 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
COL11A1P12107 Y_RNA.581-201ENST00000391017 97 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU2-14P-201ENST00000411053 191 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.52□□□□□ -2.33
COL11A1P12107 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 MTCO1P5-201ENST00000433573 344 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC093850.1-201ENST00000454121 251 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.52□□□□□ -2.33
COL11A1P12107 SERF1AP1-201ENST00000514575 187 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-397P-201ENST00000516226 104 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC100767.1-201ENST00000528178 123 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC109810.1-201ENST00000534066 224 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AC055872.1-201ENST00000570978 278 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 AL356055.1-201ENST00000602528 446 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COL11A1P12107 UBE2WP1-201ENST00000362030 340 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNA5SP327-201ENST00000362494 101 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 snoU2_19.2-201ENST00000363024 80 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 U8.7-201ENST00000364940 136 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 SNORD50B-201ENST00000364995 70 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-1264P-201ENST00000383891 107 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-1323P-201ENST00000384025 107 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 Y_RNA.455-201ENST00000384230 98 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-910P-201ENST00000390844 107 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 MIR873-201ENST00000401120 77 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 MIR1298-201ENST00000408783 112 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 Y_RNA.602-201ENST00000410535 92 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC233266.1-201ENST00000454518 96 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-437P-201ENST00000459408 95 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC010655.3-201ENST00000478818 450 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-635P-201ENST00000516651 102 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-1096P-201ENST00000517089 102 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 Y_RNA.721-201ENST00000517207 102 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.51□□□□□ -2.33
COL11A1P12107 RNU6-988P-201ENST00000519081 107 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC024405.2-202ENST00000532731 184 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC242852.1-201ENST00000612151 96 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 AC244015.1-201ENST00000622301 99 ntBASIC0.51□□□□□ -2.33
COL11A1P12107 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
COL11A1P12107 Y_RNA.64-201ENST00000362845 102 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 Y_RNA.136-201ENST00000363444 102 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 Y_RNA.253-201ENST00000364562 112 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 SNORA72.4-201ENST00000384174 132 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MT-TT-201ENST00000387460 66 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AL392103.1-201ENST00000447000 198 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AC114811.1-201ENST00000507207 168 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 SNORD111.1-201ENST00000516421 86 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.5□□□□□ -2.33
COL11A1P12107 AC019288.1-201ENST00000557918 224 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR4764-201ENST00000580680 88 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR4680-201ENST00000580906 66 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR2681-201ENST00000581814 105 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR4802-201ENST00000581881 80 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR548AR-201ENST00000582191 57 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AC120024.3-201ENST00000603167 156 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AC104695.3-201ENST00000604052 296 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL11A1P12107 Y_RNA.210-201ENST00000364161 110 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RNU4-76P-201ENST00000364509 141 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 Y_RNA.336-201ENST00000365307 109 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR606-201ENST00000384851 96 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MIR520C-201ENST00000385005 87 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RNU6-1109P-201ENST00000391187 107 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 SNORA36B-201ENST00000410438 131 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 MTCYBP6-201ENST00000441810 138 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 AC023449.1-201ENST00000454464 154 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RPS26P48-201ENST00000491713 339 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 PSMC1P5-201ENST00000512850 177 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RN7SKP164-201ENST00000516138 266 ntBASIC0.5□□□□□ -2.33
COL11A1P12107 RNU6-917P-201ENST00000516294 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms