Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MIR4473-201ENST00000583731 91 ntBASIC-1.29□□□□□ -2.62
APOBP04114 MIR4293-201ENST00000584305 78 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AL133255.1-201ENST00000606374 441 ntBASIC-1.29□□□□□ -2.62
APOBP04114 RPS27AP14-201ENST00000422868 454 ntBASIC-1.29□□□□□ -2.62
APOBP04114 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AC245505.1-201ENST00000556398 224 ntBASIC-1.29□□□□□ -2.62
APOBP04114 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AL353813.1-201ENST00000440700 253 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AC114982.2-201ENST00000461396 358 ntBASIC-1.29□□□□□ -2.62
APOBP04114 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.29□□□□□ -2.62
APOBP04114 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AL049861.1-201ENST00000603130 150 ntBASIC-1.29□□□□□ -2.62
APOBP04114 RNU6-90P-201ENST00000606352 106 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AC068880.4-201ENST00000623082 495 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AC090617.9-201ENST00000623751 147 ntBASIC-1.29□□□□□ -2.62
APOBP04114 SNORA43.4-201ENST00000629559 138 ntBASIC-1.29□□□□□ -2.62
APOBP04114 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.3□□□□□ -2.62
APOBP04114 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.3□□□□□ -2.62
APOBP04114 RNU7-13P-201ENST00000516413 62 ntBASIC-1.3□□□□□ -2.62
APOBP04114 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.3□□□□□ -2.62
APOBP04114 MIR548H3-201ENST00000408771 118 ntBASIC-1.3□□□□□ -2.62
APOBP04114 SNORD75.2-201ENST00000408784 58 ntBASIC-1.3□□□□□ -2.62
APOBP04114 AC103706.2-201ENST00000638080 240 ntBASIC-1.3□□□□□ -2.62
APOBP04114 SNORA18-201ENST00000384416 132 ntBASIC-1.3□□□□□ -2.62
APOBP04114 USP9YP30-201ENST00000430729 455 ntBASIC-1.3□□□□□ -2.62
APOBP04114 SNORD63.1-201ENST00000516178 80 ntBASIC-1.3□□□□□ -2.62
APOBP04114 AC109479.2-201ENST00000517842 174 ntBASIC-1.3□□□□□ -2.62
APOBP04114 RNU7-10P-201ENST00000607194 63 ntBASIC-1.3□□□□□ -2.62
APOBP04114 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.3□□□□□ -2.62
APOBP04114 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.3□□□□□ -2.62
APOBP04114 SNORD115-16-201ENST00000363887 82 ntBASIC-1.3□□□□□ -2.62
APOBP04114 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.3□□□□□ -2.62
APOBP04114 RNU6-442P-201ENST00000383968 104 ntBASIC-1.3□□□□□ -2.62
APOBP04114 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.3□□□□□ -2.62
APOBP04114 RNU6-430P-201ENST00000517078 107 ntBASIC-1.3□□□□□ -2.62
APOBP04114 ADI1P3-201ENST00000549509 470 ntBASIC-1.3□□□□□ -2.62
APOBP04114 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
APOBP04114 AC022441.3-201ENST00000605737 136 ntBASIC-1.3□□□□□ -2.62
APOBP04114 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNU6-987P-201ENST00000384759 104 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNU6-437P-201ENST00000459408 95 ntBASIC-1.31□□□□□ -2.62
APOBP04114 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNA5SP26-201ENST00000362406 119 ntBASIC-1.31□□□□□ -2.62
APOBP04114 MTCYBP4-201ENST00000401524 249 ntBASIC-1.31□□□□□ -2.62
APOBP04114 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.31□□□□□ -2.62
APOBP04114 RNU2-13P-201ENST00000515909 113 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNA5SP54-201ENST00000516951 92 ntBASIC-1.31□□□□□ -2.62
APOBP04114 MIR3146-201ENST00000580367 79 ntBASIC-1.31□□□□□ -2.62
APOBP04114 AC133104.2-201ENST00000615272 193 ntBASIC-1.31□□□□□ -2.62
APOBP04114 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNU6-853P-201ENST00000364306 107 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNU6-855P-201ENST00000410395 104 ntBASIC-1.31□□□□□ -2.62
APOBP04114 HIF1AP1-201ENST00000553642 175 ntBASIC-1.31□□□□□ -2.62
APOBP04114 AP001836.1-201ENST00000604675 523 ntBASIC-1.31□□□□□ -2.62
APOBP04114 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.31□□□□□ -2.62
APOBP04114 AL138960.2-201ENST00000625145 535 ntBASIC-1.31□□□□□ -2.62
APOBP04114 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC004866.1-201ENST00000411748 78 ntBASIC-1.32□□□□□ -2.62
APOBP04114 ELOCP17-201ENST00000414751 326 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AL008987.1-201ENST00000415528 237 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.32□□□□□ -2.62
APOBP04114 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.32□□□□□ -2.62
APOBP04114 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.32□□□□□ -2.62
APOBP04114 SNORD77.3-201ENST00000391113 65 ntBASIC-1.32□□□□□ -2.62
APOBP04114 TPTE2P5-203ENST00000458118 728 ntBASIC-1.32□□□□□ -2.62
APOBP04114 RNU6-175P-201ENST00000516896 107 ntBASIC-1.32□□□□□ -2.62
APOBP04114 Z94722.1-201ENST00000604328 474 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AL450270.1-201ENST00000606160 391 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC011603.4-201ENST00000611325 277 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC107905.1-201ENST00000616204 426 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC069503.3-201ENST00000618674 145 ntBASIC-1.32□□□□□ -2.62
APOBP04114 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.32□□□□□ -2.62
APOBP04114 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.32□□□□□ -2.62
APOBP04114 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AL359672.1-201ENST00000442302 409 ntBASIC-1.32□□□□□ -2.62
APOBP04114 MTCO1P31-201ENST00000506355 492 ntBASIC-1.32□□□□□ -2.62
APOBP04114 FTX_4.1-201ENST00000616291 147 ntBASIC-1.32□□□□□ -2.62
APOBP04114 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.32□□□□□ -2.62
APOBP04114 MIR617-201ENST00000385030 97 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC090616.4-201ENST00000448026 115 ntBASIC-1.32□□□□□ -2.62
APOBP04114 RNU7-136P-201ENST00000458819 69 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC055872.1-201ENST00000570978 278 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC133794.1-201ENST00000602731 914 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC012409.4-201ENST00000612923 249 ntBASIC-1.32□□□□□ -2.62
APOBP04114 AC013437.2-201ENST00000639587 677 ntBASIC-1.32□□□□□ -2.62
APOBP04114 RNU6-949P-201ENST00000384040 107 ntBASIC-1.33□□□□□ -2.62
APOBP04114 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.33□□□□□ -2.62
APOBP04114 AC079140.5-201ENST00000507882 310 ntBASIC-1.33□□□□□ -2.62
APOBP04114 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.33□□□□□ -2.62
APOBP04114 AC090616.2-202ENST00000584248 222 ntBASIC-1.33□□□□□ -2.62
APOBP04114 PART1_1.1-201ENST00000611761 217 ntBASIC-1.33□□□□□ -2.62
APOBP04114 AC132825.7-201ENST00000638744 335 ntBASIC-1.33□□□□□ -2.62
APOBP04114 RPL30P10-201ENST00000488148 337 ntBASIC-1.33□□□□□ -2.62
APOBP04114 MIR548H5-201ENST00000580314 60 ntBASIC-1.33□□□□□ -2.62
APOBP04114 AC080013.3-201ENST00000606839 578 ntBASIC-1.33□□□□□ -2.62
APOBP04114 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.33□□□□□ -2.62
APOBP04114 AC114878.1-201ENST00000441166 358 ntBASIC-1.33□□□□□ -2.62
APOBP04114 AC010598.1-201ENST00000510378 103 ntBASIC-1.33□□□□□ -2.62
APOBP04114 RNU6-966P-201ENST00000516479 104 ntBASIC-1.33□□□□□ -2.62
APOBP04114 FRG2DP-202ENST00000566967 323 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms