Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-1084P-201ENST00000362498 107 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 Y_RNA.116-201ENST00000363292 103 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 Y_RNA.281-201ENST00000364774 94 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 snoU2-30.1-201ENST00000365012 70 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 RNU6-1189P-201ENST00000383958 107 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 MIR570-201ENST00000384917 97 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 RPL23AP6-201ENST00000446637 472 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 AL031737.1-201ENST00000450125 223 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 COX6CP6-201ENST00000490840 228 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 uc_338.28-201ENST00000612082 187 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 MIR7843-201ENST00000622274 79 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
CNOT4O95628 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CNOT4O95628 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CNOT4O95628 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CNOT4O95628 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNOT4O95628 MIR450A1-201ENST00000362262 91 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNU6-32P-201ENST00000383948 107 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNU6-13P-201ENST00000384248 107 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNU6-12P-201ENST00000384604 107 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNU6-41P-201ENST00000384741 107 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 MIR1283-2-201ENST00000408621 87 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 AC099677.2-201ENST00000436385 175 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNA5SP57-201ENST00000459463 123 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNA5SP24-201ENST00000516478 95 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 RNU7-25P-201ENST00000516544 62 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 AC007012.1-201ENST00000567192 175 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 MIR3169-201ENST00000578032 83 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 MIR4635-201ENST00000583759 79 ntBASIC2.32□□□□□ -2.04
CNOT4O95628 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CNOT4O95628 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CNOT4O95628 U8.2-201ENST00000363156 134 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 RNU6-268P-201ENST00000364174 107 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 SNORA2.2-201ENST00000365473 135 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 Y_RNA.495-201ENST00000384435 112 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CNOT4O95628 RNA5SP482-201ENST00000391269 118 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 AC245047.3-201ENST00000429428 127 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 SNRPGP14-201ENST00000435400 219 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 RNA5SP233-201ENST00000459153 113 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 RPS26P48-201ENST00000491713 339 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.31□□□□□ -2.04
CNOT4O95628 RNU6-240P-201ENST00000516098 97 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
CNOT4O95628 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CNOT4O95628 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CNOT4O95628 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CNOT4O95628 SNORD115-28-201ENST00000363931 81 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 RNU6-1107P-201ENST00000364817 104 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 Y_RNA.336-201ENST00000365307 109 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 snoU13.26-201ENST00000459452 105 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 RNU7-28P-201ENST00000516759 62 ntBASIC2.3□□□□□ -2.04
CNOT4O95628 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
CNOT4O95628 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CNOT4O95628 Y_RNA.37-201ENST00000362606 108 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 Y_RNA.85-201ENST00000363014 111 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 Y_RNA.265-201ENST00000364677 108 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 RNU6-106P-201ENST00000384405 107 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 Y_RNA.547-201ENST00000384654 119 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 SNORD12C-201ENST00000386307 89 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 AL606517.2-201ENST00000442855 241 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 Y_RNA.694-201ENST00000516677 117 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
CNOT4O95628 RNU6-690P-201ENST00000365242 106 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 RNU6-554P-201ENST00000410466 106 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.28□□□□□ -2.04
CNOT4O95628 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.28□□□□□ -2.04
CNOT4O95628 RNU7-70P-201ENST00000516941 66 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 MIR4524B-201ENST00000581569 115 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 AC005786.1-201ENST00000588553 154 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 AL627230.6-201ENST00000611129 280 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
CNOT4O95628 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
CNOT4O95628 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CNOT4O95628 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNOT4O95628 SNORA67.4-201ENST00000384688 142 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 RNA5SP109-201ENST00000391010 116 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 HMGN2P19-201ENST00000425149 265 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 HMGN2P32-201ENST00000444648 269 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.27□□□□□ -2.05
CNOT4O95628 SNORD36C-201ENST00000516733 66 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 AC006254.2-201ENST00000603259 279 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 AC022513.1-201ENST00000624512 117 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 MIR4679-1-201ENST00000637619 75 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms