Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 AC139713.2-215ENST00000641428 5037 ntBASIC4.76□□□□□ -1.65
NPM3O75607 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPM3O75607 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NPM3O75607 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NPM3O75607 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPM3O75607 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPM3O75607 RNU6-1123P-201ENST00000362347 106 ntBASIC4.75□□□□□ -1.65
NPM3O75607 RNU6-154P-201ENST00000384306 106 ntBASIC4.75□□□□□ -1.65
NPM3O75607 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NPM3O75607 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPM3O75607 RNA5SP445-201ENST00000515889 115 ntBASIC4.75□□□□□ -1.65
NPM3O75607 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPM3O75607 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPM3O75607 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.74□□□□□ -1.65
NPM3O75607 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.74□□□□□ -1.65
NPM3O75607 AC087190.4-201ENST00000574616 8334 ntBASIC4.74□□□□□ -1.65
NPM3O75607 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPM3O75607 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPM3O75607 RNU6-957P-201ENST00000363652 99 ntBASIC4.73□□□□□ -1.65
NPM3O75607 RNA5SP399-201ENST00000364003 117 ntBASIC4.73□□□□□ -1.65
NPM3O75607 RNU6-53P-201ENST00000365367 106 ntBASIC4.73□□□□□ -1.65
NPM3O75607 MIR449B-201ENST00000384995 97 ntBASIC4.73□□□□□ -1.65
NPM3O75607 SNORD90-201ENST00000391145 111 ntBASIC4.73□□□□□ -1.65
NPM3O75607 AC083863.1-201ENST00000438811 231 ntBASIC4.73□□□□□ -1.65
NPM3O75607 RNA5SP179-201ENST00000517284 121 ntBASIC4.73□□□□□ -1.65
NPM3O75607 AC091167.4-201ENST00000605079 184 ntBASIC4.73□□□□□ -1.65
NPM3O75607 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPM3O75607 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.73□□□□□ -1.65
NPM3O75607 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPM3O75607 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.72□□□□□ -1.65
NPM3O75607 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NPM3O75607 SNORD35B-201ENST00000363660 87 ntBASIC4.72□□□□□ -1.65
NPM3O75607 RNU6-340P-201ENST00000364005 107 ntBASIC4.72□□□□□ -1.65
NPM3O75607 RNU6-291P-201ENST00000384720 107 ntBASIC4.72□□□□□ -1.65
NPM3O75607 SNORA3.3-201ENST00000408712 125 ntBASIC4.72□□□□□ -1.65
NPM3O75607 RN7SL323P-201ENST00000494712 295 ntBASIC4.72□□□□□ -1.65
NPM3O75607 AL121772.2-201ENST00000614331 297 ntBASIC4.72□□□□□ -1.65
NPM3O75607 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.72□□□□□ -1.65
NPM3O75607 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.72□□□□□ -1.65
NPM3O75607 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPM3O75607 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPM3O75607 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPM3O75607 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
NPM3O75607 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NPM3O75607 RNU6-330P-201ENST00000363015 107 ntBASIC4.71□□□□□ -1.66
NPM3O75607 RNU6-1051P-201ENST00000365471 102 ntBASIC4.71□□□□□ -1.66
NPM3O75607 Y_RNA.371-201ENST00000365591 113 ntBASIC4.71□□□□□ -1.66
NPM3O75607 RNU1-148P-201ENST00000384472 162 ntBASIC4.71□□□□□ -1.66
NPM3O75607 MIR30B-201ENST00000384850 88 ntBASIC4.71□□□□□ -1.66
NPM3O75607 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPM3O75607 snoU13.17-201ENST00000458802 104 ntBASIC4.71□□□□□ -1.66
NPM3O75607 RNA5SP143-201ENST00000516936 115 ntBASIC4.71□□□□□ -1.66
NPM3O75607 SNORA51-201ENST00000606420 132 ntBASIC4.71□□□□□ -1.66
NPM3O75607 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPM3O75607 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPM3O75607 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPM3O75607 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
NPM3O75607 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPM3O75607 AL365361.1-201ENST00000566942 3481 ntBASIC4.7□□□□□ -1.66
NPM3O75607 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.7□□□□□ -1.66
NPM3O75607 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPM3O75607 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.7□□□□□ -1.66
NPM3O75607 RNA5SP124-201ENST00000362739 110 ntBASIC4.7□□□□□ -1.66
NPM3O75607 SNORA57.3-201ENST00000411095 141 ntBASIC4.7□□□□□ -1.66
NPM3O75607 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.7□□□□□ -1.66
NPM3O75607 RNU7-106P-201ENST00000459514 67 ntBASIC4.7□□□□□ -1.66
NPM3O75607 MIR3675-201ENST00000583661 73 ntBASIC4.7□□□□□ -1.66
NPM3O75607 AC008739.3-201ENST00000603262 127 ntBASIC4.7□□□□□ -1.66
NPM3O75607 MIR8053-201ENST00000613344 75 ntBASIC4.7□□□□□ -1.66
NPM3O75607 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NPM3O75607 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPM3O75607 SNORA71.3-201ENST00000362582 128 ntBASIC4.69□□□□□ -1.66
NPM3O75607 RNU4-58P-201ENST00000363192 141 ntBASIC4.69□□□□□ -1.66
NPM3O75607 Y_RNA.207-201ENST00000364142 106 ntBASIC4.69□□□□□ -1.66
NPM3O75607 Y_RNA.443-201ENST00000384135 111 ntBASIC4.69□□□□□ -1.66
NPM3O75607 MIR200C-201ENST00000384980 68 ntBASIC4.69□□□□□ -1.66
NPM3O75607 SNORA3C-201ENST00000408792 125 ntBASIC4.69□□□□□ -1.66
NPM3O75607 SNORD63B-201ENST00000411005 70 ntBASIC4.69□□□□□ -1.66
NPM3O75607 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.69□□□□□ -1.66
NPM3O75607 PRELID3BP2-201ENST00000605362 201 ntBASIC4.69□□□□□ -1.66
NPM3O75607 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPM3O75607 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NPM3O75607 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPM3O75607 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NPM3O75607 AC016717.2-201ENST00000609089 5141 ntBASIC4.68□□□□□ -1.66
NPM3O75607 Y_RNA.239-201ENST00000364444 113 ntBASIC4.68□□□□□ -1.66
NPM3O75607 RNU6-396P-201ENST00000365369 105 ntBASIC4.68□□□□□ -1.66
NPM3O75607 MIR518A2-201ENST00000384966 87 ntBASIC4.68□□□□□ -1.66
NPM3O75607 MIR670-201ENST00000390142 98 ntBASIC4.68□□□□□ -1.66
NPM3O75607 HDGFP1-201ENST00000405943 252 ntBASIC4.68□□□□□ -1.66
NPM3O75607 MIR1251-201ENST00000408552 70 ntBASIC4.68□□□□□ -1.66
NPM3O75607 AC105272.1-201ENST00000438604 198 ntBASIC4.68□□□□□ -1.66
NPM3O75607 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.68□□□□□ -1.66
NPM3O75607 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.68□□□□□ -1.66
NPM3O75607 RNU6-513P-201ENST00000516104 104 ntBASIC4.68□□□□□ -1.66
NPM3O75607 RNU6-1194P-201ENST00000516208 104 ntBASIC4.68□□□□□ -1.66
NPM3O75607 AC087499.8-201ENST00000578406 226 ntBASIC4.68□□□□□ -1.66
NPM3O75607 MIR7154-201ENST00000620673 73 ntBASIC4.68□□□□□ -1.66
NPM3O75607 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPM3O75607 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms