Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SNORD116-15-201ENST00000384445 92 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 SNORD116-19-201ENST00000384729 92 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 MIR452-201ENST00000385020 85 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 AL603914.1-201ENST00000401964 204 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 AC015922.2-201ENST00000435593 184 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 PGBD4P5-201ENST00000445958 426 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 RNU4-57P-201ENST00000515980 135 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 RNU6-1149P-201ENST00000516810 97 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 MIR5197-201ENST00000583721 112 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 MIR4298-201ENST00000584380 73 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 SNORD3E-202ENST00000627253 216 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 MIR203B-201ENST00000636080 86 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
PRPF40AO75400 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PRPF40AO75400 MIR660-201ENST00000385235 97 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 RNU6-1168P-201ENST00000390831 104 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.64□□□□□ -1.99
PRPF40AO75400 AC008413.1-201ENST00000511864 177 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 RNU6-1333P-201ENST00000516162 93 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 RNA5SP24-201ENST00000516478 95 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 AC046143.2-201ENST00000609789 160 ntBASIC2.64□□□□□ -1.99
PRPF40AO75400 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
PRPF40AO75400 Y_RNA.127-201ENST00000363386 109 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 Y_RNA.294-201ENST00000364916 102 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RNU6-360P-201ENST00000390944 104 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 AC087499.4-201ENST00000448505 178 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 AC093850.1-201ENST00000454121 251 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RN7SL429P-201ENST00000479090 223 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RN7SL489P-201ENST00000486185 223 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RN7SL327P-201ENST00000488659 223 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RNU2-60P-201ENST00000517290 128 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF40AO75400 MIR5694-201ENST00000581190 76 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 RN7SL853P-201ENST00000617250 223 ntBASIC2.63□□□□□ -1.99
PRPF40AO75400 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PRPF40AO75400 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRPF40AO75400 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRPF40AO75400 SNORA2.2-201ENST00000365473 135 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 SNORA22C-201ENST00000384614 134 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 AP003484.1-201ENST00000530974 250 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.62□□□□□ -1.99
PRPF40AO75400 MIR4778-201ENST00000577635 80 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF40AO75400 MIR6766-201ENST00000622641 72 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 AP000553.5-201ENST00000641933 54 ntBASIC2.62□□□□□ -1.99
PRPF40AO75400 MIR424-201ENST00000362227 98 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 RNA5SP289-201ENST00000362332 137 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 RNA5SP212-201ENST00000391223 107 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 SNORD36C-201ENST00000516733 66 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 SNORA18.7-201ENST00000516910 131 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 RNU7-70P-201ENST00000516941 66 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 MIR4287-201ENST00000579398 78 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 AL022345.2-201ENST00000606307 135 ntBASIC2.61□□□□□ -1.99
PRPF40AO75400 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.61□□□□□ -1.99
PRPF40AO75400 AC008555.8-201ENST00000623602 2168 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 RNU6-235P-201ENST00000362644 107 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 RNU6-309P-201ENST00000364573 106 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 MIR516B2-201ENST00000385190 85 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.6□□□□□ -1.99
PRPF40AO75400 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.6□□□□□ -1.99
PRPF40AO75400 RN7SKP179-201ENST00000516126 217 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 RNU6-830P-201ENST00000516353 107 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 AC090049.2-201ENST00000550377 109 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 MIR3121-201ENST00000579680 77 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 AC103810.6-201ENST00000606708 136 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.6□□□□□ -1.99
PRPF40AO75400 AL590808.1-201ENST00000618696 141 ntBASIC2.6□□□□□ -1.99
PRPF40AO75400 Y_RNA.114-201ENST00000363265 113 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 Y_RNA.261-201ENST00000364631 102 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 MIR136-201ENST00000385207 82 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 IGLV3-17-201ENST00000519099 244 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 AL359881.1-201ENST00000602916 267 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 MIR376A2-201ENST00000636782 80 ntBASIC2.59□□□□□ -1.99
PRPF40AO75400 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PRPF40AO75400 Y_RNA.241-201ENST00000364470 117 ntBASIC2.58□□□□□ -2
PRPF40AO75400 MIR5007-201ENST00000583098 95 ntBASIC2.58□□□□□ -2
PRPF40AO75400 MIR5002-201ENST00000584713 97 ntBASIC2.58□□□□□ -2
PRPF40AO75400 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.58□□□□□ -2
PRPF40AO75400 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.58□□□□□ -2
PRPF40AO75400 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF40AO75400 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF40AO75400 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.57□□□□□ -2
PRPF40AO75400 RNU6-414P-201ENST00000363705 104 ntBASIC2.57□□□□□ -2
PRPF40AO75400 RNU6-647P-201ENST00000364243 107 ntBASIC2.57□□□□□ -2
PRPF40AO75400 SNORA16B-201ENST00000364674 135 ntBASIC2.57□□□□□ -2
PRPF40AO75400 SNORA6-201ENST00000384033 151 ntBASIC2.57□□□□□ -2
PRPF40AO75400 RNU6-938P-201ENST00000411285 103 ntBASIC2.57□□□□□ -2
PRPF40AO75400 AL158147.1-201ENST00000443970 75 ntBASIC2.57□□□□□ -2
PRPF40AO75400 AC090255.1-201ENST00000495779 349 ntBASIC2.57□□□□□ -2
PRPF40AO75400 RNA5SP236-201ENST00000516169 116 ntBASIC2.57□□□□□ -2
PRPF40AO75400 SCARNA15-202ENST00000516881 127 ntBASIC2.57□□□□□ -2
PRPF40AO75400 RNU6-1123P-201ENST00000362347 106 ntBASIC2.56□□□□□ -2
PRPF40AO75400 RNU6-508P-201ENST00000363231 103 ntBASIC2.56□□□□□ -2
PRPF40AO75400 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
PRPF40AO75400 AC064859.1-201ENST00000624741 174 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms