Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AC073413.2-201ENST00000604332 360 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 SNORA16B-201ENST00000364674 135 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 Y_RNA.634-201ENST00000364811 113 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU6-643P-201ENST00000384018 107 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1FO60840 AL163195.1-201ENST00000496941 348 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU6-346P-201ENST00000516288 111 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU6-667P-201ENST00000517186 102 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1FO60840 AL049861.1-201ENST00000603130 150 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AL359075.3-201ENST00000613288 217 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 SNORD68-201ENST00000363214 84 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 RNU6-1323P-201ENST00000384025 107 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.53□□□□□ -2.16
CACNA1FO60840 SNRPGP8-201ENST00000454064 226 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 AC023449.1-201ENST00000454464 154 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 RNU6-561P-201ENST00000516222 102 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.53□□□□□ -2.16
CACNA1FO60840 SNORA4-201ENST00000584302 138 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 U6.73-201ENST00000619194 103 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 MTND1P7-201ENST00000632801 297 ntBASIC1.53□□□□□ -2.16
CACNA1FO60840 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR340-201ENST00000362125 95 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 RNU6-1084P-201ENST00000362498 107 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 RNU6-597P-201ENST00000365620 102 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 RNA5SP496-201ENST00000391240 109 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 RNA5SP272-201ENST00000516095 111 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR4452-201ENST00000583004 71 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR3658-201ENST00000636291 56 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CACNA1FO60840 RNU6-275P-201ENST00000364910 107 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 Y_RNA.488-201ENST00000384403 102 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 Y_RNA.587-201ENST00000391210 103 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR3646-201ENST00000578301 84 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR2681-201ENST00000581814 105 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 AL021707.8-201ENST00000609428 183 ntBASIC1.52□□□□□ -2.17
CACNA1FO60840 MIR96-201ENST00000362288 78 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 Y_RNA.267-201ENST00000364679 109 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 RNU2-51P-201ENST00000410708 197 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.51□□□□□ -2.17
CACNA1FO60840 AC245047.3-201ENST00000429428 127 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 RNU6-1041P-201ENST00000516254 102 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 RNU6-1234P-201ENST00000516877 103 ntBASIC1.51□□□□□ -2.17
CACNA1FO60840 SNORD115-3-201ENST00000363100 82 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-1019P-201ENST00000364424 107 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 Y_RNA.432-201ENST00000384087 111 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 MIR613-201ENST00000385248 95 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 Y_RNA.580-201ENST00000391004 95 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-588P-201ENST00000410281 105 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1FO60840 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
CACNA1FO60840 TMSB4XP3-201ENST00000445144 114 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RPL23AP6-201ENST00000446637 472 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-1211P-201ENST00000459179 105 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC018868.1-201ENST00000491307 315 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC107027.2-201ENST00000512197 115 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-693P-201ENST00000516134 107 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1FO60840 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
CACNA1FO60840 MIR367-201ENST00000362299 68 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 snoU2_19.4-201ENST00000364329 80 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 Y_RNA.229-201ENST00000364347 113 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 Y_RNA.393-201ENST00000383936 102 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-22P-201ENST00000384355 107 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-1081P-201ENST00000384537 107 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 Y_RNA.542-201ENST00000384641 111 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 MIR520G-201ENST00000385064 90 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU6-131P-201ENST00000391144 107 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 CST2P1-201ENST00000425770 87 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AL606517.2-201ENST00000442855 241 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AL121914.1-201ENST00000450188 156 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 RNU7-99P-201ENST00000516271 62 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 AC103810.9-201ENST00000606688 112 ntBASIC1.5□□□□□ -2.17
CACNA1FO60840 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CACNA1FO60840 SNORA1B-201ENST00000362535 133 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 SNORA25B-201ENST00000365507 128 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 RNA5SP323-201ENST00000391094 133 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 AC069257.2-201ENST00000441819 155 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 RNA5SP102-201ENST00000516865 106 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 Y_RNA.714-201ENST00000517065 90 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 AC022217.4-201ENST00000604389 163 ntBASIC1.49□□□□□ -2.17
CACNA1FO60840 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 RNU6-1228P-201ENST00000391014 107 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 RNA5SP465-201ENST00000391195 109 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 MLLT10P1-201ENST00000418346 262 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 AC092991.1-201ENST00000477176 376 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms