Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
SNX2O60749 PCNPP3-201ENST00000393579 471 ntBASIC1.8□□□□□ -2.12
SNX2O60749 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
SNX2O60749 SUMO2P16-201ENST00000519475 264 ntBASIC1.8□□□□□ -2.12
SNX2O60749 AC087685.1-201ENST00000587507 141 ntBASIC1.8□□□□□ -2.12
SNX2O60749 AC098479.1-201ENST00000609225 154 ntBASIC1.8□□□□□ -2.12
SNX2O60749 MIR8081-201ENST00000611533 95 ntBASIC1.8□□□□□ -2.12
SNX2O60749 MIR8063-201ENST00000621930 81 ntBASIC1.8□□□□□ -2.12
SNX2O60749 AC027279.3-201ENST00000625055 122 ntBASIC1.8□□□□□ -2.12
SNX2O60749 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
SNX2O60749 Y_RNA.91-201ENST00000363042 107 ntBASIC1.79□□□□□ -2.12
SNX2O60749 SNORD14E-201ENST00000364009 85 ntBASIC1.79□□□□□ -2.12
SNX2O60749 Y_RNA.240-201ENST00000364469 95 ntBASIC1.79□□□□□ -2.12
SNX2O60749 RNU6-728P-201ENST00000365375 104 ntBASIC1.79□□□□□ -2.12
SNX2O60749 RPL30P13-201ENST00000418873 348 ntBASIC1.79□□□□□ -2.12
SNX2O60749 SNRPGP14-201ENST00000435400 219 ntBASIC1.79□□□□□ -2.12
SNX2O60749 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
SNX2O60749 RNU6-1299P-201ENST00000516316 100 ntBASIC1.79□□□□□ -2.12
SNX2O60749 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
SNX2O60749 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
SNX2O60749 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
SNX2O60749 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SNX2O60749 RNU6-833P-201ENST00000363486 107 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU6-886P-201ENST00000384319 105 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
SNX2O60749 MIR891A-201ENST00000401237 79 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU5E-9P-201ENST00000411164 104 ntBASIC1.78□□□□□ -2.12
SNX2O60749 SEPT7P4-201ENST00000437076 306 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
SNX2O60749 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
SNX2O60749 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX2O60749 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
SNX2O60749 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
SNX2O60749 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
SNX2O60749 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.78□□□□□ -2.12
SNX2O60749 MIR302D-201ENST00000362275 68 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
SNX2O60749 Y_RNA.270-201ENST00000364693 104 ntBASIC1.77□□□□□ -2.13
SNX2O60749 SNORD1A-201ENST00000364968 72 ntBASIC1.77□□□□□ -2.13
SNX2O60749 Y_RNA.432-201ENST00000384087 111 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
SNX2O60749 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RNU2-55P-201ENST00000411146 174 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
SNX2O60749 Y_RNA.662-201ENST00000516028 97 ntBASIC1.77□□□□□ -2.13
SNX2O60749 Y_RNA.666-201ENST00000516187 112 ntBASIC1.77□□□□□ -2.13
SNX2O60749 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
SNX2O60749 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
SNX2O60749 AC106754.2-201ENST00000623006 233 ntBASIC1.77□□□□□ -2.13
SNX2O60749 RNA5SP432-201ENST00000362480 116 ntBASIC1.76□□□□□ -2.13
SNX2O60749 Y_RNA.23-201ENST00000362496 106 ntBASIC1.76□□□□□ -2.13
SNX2O60749 Y_RNA.634-201ENST00000364811 113 ntBASIC1.76□□□□□ -2.13
SNX2O60749 RNU6-442P-201ENST00000383968 104 ntBASIC1.76□□□□□ -2.13
SNX2O60749 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
SNX2O60749 MIR802-201ENST00000390235 94 ntBASIC1.76□□□□□ -2.13
SNX2O60749 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
SNX2O60749 RNU4-43P-201ENST00000410628 137 ntBASIC1.76□□□□□ -2.13
SNX2O60749 SNORA25.15-201ENST00000516487 89 ntBASIC1.76□□□□□ -2.13
SNX2O60749 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.76□□□□□ -2.13
SNX2O60749 AC015688.6-201ENST00000577737 104 ntBASIC1.76□□□□□ -2.13
SNX2O60749 AL121890.5-201ENST00000620848 304 ntBASIC1.76□□□□□ -2.13
SNX2O60749 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SNX2O60749 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNX2O60749 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
SNX2O60749 Y_RNA.336-201ENST00000365307 109 ntBASIC1.75□□□□□ -2.13
SNX2O60749 RNU6-1065P-201ENST00000384513 106 ntBASIC1.75□□□□□ -2.13
SNX2O60749 RNU2-70P-201ENST00000410718 179 ntBASIC1.75□□□□□ -2.13
SNX2O60749 RNU6-197P-201ENST00000516680 100 ntBASIC1.75□□□□□ -2.13
SNX2O60749 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.75□□□□□ -2.13
SNX2O60749 MIR4662B-201ENST00000579498 81 ntBASIC1.75□□□□□ -2.13
SNX2O60749 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNX2O60749 SNORD61-201ENST00000384252 73 ntBASIC1.74□□□□□ -2.13
SNX2O60749 Y_RNA.555-201ENST00000384673 110 ntBASIC1.74□□□□□ -2.13
SNX2O60749 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
SNX2O60749 MIR516B2-201ENST00000385190 85 ntBASIC1.74□□□□□ -2.13
SNX2O60749 MIR548I3-201ENST00000408378 149 ntBASIC1.74□□□□□ -2.13
SNX2O60749 MIR548I1-201ENST00000408810 149 ntBASIC1.74□□□□□ -2.13
SNX2O60749 AC006461.1-201ENST00000412637 326 ntBASIC1.74□□□□□ -2.13
SNX2O60749 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
SNX2O60749 RNA5SP153-201ENST00000516498 76 ntBASIC1.74□□□□□ -2.13
SNX2O60749 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
SNX2O60749 MIR4431-201ENST00000579990 94 ntBASIC1.74□□□□□ -2.13
SNX2O60749 AC006441.5-201ENST00000612680 209 ntBASIC1.74□□□□□ -2.13
SNX2O60749 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SNX2O60749 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SNX2O60749 Y_RNA.66-201ENST00000362862 102 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU1-17P-201ENST00000363022 152 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNA5SP259-201ENST00000365541 109 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU6-643P-201ENST00000384018 107 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU6-1135P-201ENST00000411083 103 ntBASIC1.73□□□□□ -2.13
SNX2O60749 AC015922.2-201ENST00000435593 184 ntBASIC1.73□□□□□ -2.13
SNX2O60749 HMGN2P32-201ENST00000444648 269 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU6-917P-201ENST00000516294 104 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU6-365P-201ENST00000517113 106 ntBASIC1.73□□□□□ -2.13
SNX2O60749 AC007751.1-201ENST00000529260 376 ntBASIC1.73□□□□□ -2.13
SNX2O60749 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
SNX2O60749 AC097639.2-201ENST00000603159 172 ntBASIC1.73□□□□□ -2.13
SNX2O60749 RNU6-199P-201ENST00000362954 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms