Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
GFRA3O60609 AL109933.3-201ENST00000619095 188 ntBASIC3.42□□□□□ -1.86
GFRA3O60609 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
GFRA3O60609 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA3O60609 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA3O60609 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA3O60609 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA3O60609 MAPK10-253ENST00000641010 4072 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA3O60609 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.41□□□□□ -1.86
GFRA3O60609 MIRLET7C-201ENST00000362160 84 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 SNORD113-4-201ENST00000364802 75 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 HMGN1P33-201ENST00000432945 451 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 AL691482.2-201ENST00000457453 84 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 RNA5SP310-201ENST00000459084 116 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 RNU6-586P-201ENST00000517265 104 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA3O60609 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
GFRA3O60609 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA3O60609 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
GFRA3O60609 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
GFRA3O60609 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
GFRA3O60609 RNU6-50P-201ENST00000362356 103 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 RNU6-369P-201ENST00000362515 102 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 RNU6-340P-201ENST00000364005 107 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 SNORA1.2-201ENST00000365189 134 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 RNA5SP306-201ENST00000411087 107 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 RPS26P15-201ENST00000488067 348 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 RPS29P11-201ENST00000496507 171 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 MIR3675-201ENST00000583661 73 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 AC092634.7-201ENST00000621022 103 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 MIR4727-201ENST00000622232 55 ntBASIC3.4□□□□□ -1.87
GFRA3O60609 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.4□□□□□ -1.87
GFRA3O60609 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
GFRA3O60609 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 AC245060.5-201ENST00000610778 3293 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 SNORA38-201ENST00000363946 132 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 RNU6-163P-201ENST00000384396 106 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GFRA3O60609 RNA5SP323-201ENST00000391094 133 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 RNA5SP129-201ENST00000410276 118 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 RNU4-88P-201ENST00000411220 86 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 SNRPGP12-201ENST00000449481 213 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 snoU13.26-201ENST00000459452 105 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 AC018868.1-201ENST00000491307 315 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 RNU7-28P-201ENST00000516759 62 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 MIR8065-201ENST00000620577 100 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.39□□□□□ -1.87
GFRA3O60609 TNPO1P3-201ENST00000436471 2662 ntBASIC3.39□□□□□ -1.87
GFRA3O60609 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.39□□□□□ -1.87
GFRA3O60609 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA3O60609 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.38□□□□□ -1.87
GFRA3O60609 AC007336.1-201ENST00000576365 3828 ntBASIC3.38□□□□□ -1.87
GFRA3O60609 SNORD113.1-201ENST00000363280 73 ntBASIC3.38□□□□□ -1.87
GFRA3O60609 SNORA70B-201ENST00000384210 135 ntBASIC3.38□□□□□ -1.87
GFRA3O60609 MIR8055-201ENST00000610739 97 ntBASIC3.38□□□□□ -1.87
GFRA3O60609 MIR8053-201ENST00000613344 75 ntBASIC3.38□□□□□ -1.87
GFRA3O60609 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.38□□□□□ -1.87
GFRA3O60609 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
GFRA3O60609 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA3O60609 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GFRA3O60609 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA3O60609 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.37□□□□□ -1.87
GFRA3O60609 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
GFRA3O60609 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA3O60609 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA3O60609 RNU1-18P-201ENST00000363062 164 ntBASIC3.37□□□□□ -1.87
GFRA3O60609 SNORA72.6-201ENST00000384520 129 ntBASIC3.37□□□□□ -1.87
GFRA3O60609 AP000753.3-201ENST00000604083 169 ntBASIC3.37□□□□□ -1.87
GFRA3O60609 AC027279.3-201ENST00000625055 122 ntBASIC3.37□□□□□ -1.87
GFRA3O60609 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA3O60609 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA3O60609 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA3O60609 SNORD45.1-201ENST00000363181 77 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 Y_RNA.371-201ENST00000365591 113 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 AL606517.2-201ENST00000442855 241 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 RNU6-850P-201ENST00000516934 103 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 AC024995.1-201ENST00000523014 93 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 MIR4764-201ENST00000580680 88 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.36□□□□□ -1.87
GFRA3O60609 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA3O60609 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA3O60609 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA3O60609 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA3O60609 Y_RNA.42-201ENST00000362660 108 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 RNU6-1187P-201ENST00000364771 110 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 RNU6-1067P-201ENST00000384752 107 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 SRIP3-201ENST00000413200 219 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 AC009969.1-201ENST00000438726 172 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 AC090897.1-201ENST00000580909 226 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 MIR4765-201ENST00000585007 77 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms