Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKNO60260 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
PRKNO60260 Y_RNA.75-201ENST00000362927 97 ntBASIC1.45□□□□□ -2.18
PRKNO60260 Y_RNA.182-201ENST00000363880 111 ntBASIC1.45□□□□□ -2.18
PRKNO60260 SNORD50B-201ENST00000364995 70 ntBASIC1.45□□□□□ -2.18
PRKNO60260 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PRKNO60260 MIR1267-201ENST00000408723 78 ntBASIC1.45□□□□□ -2.18
PRKNO60260 RNU4-62P-201ENST00000410125 130 ntBASIC1.45□□□□□ -2.18
PRKNO60260 Y_RNA.622-201ENST00000411091 108 ntBASIC1.45□□□□□ -2.18
PRKNO60260 RNU5E-9P-201ENST00000411164 104 ntBASIC1.45□□□□□ -2.18
PRKNO60260 SUMO1P3-201ENST00000439961 304 ntBASIC1.45□□□□□ -2.18
PRKNO60260 AC114811.1-201ENST00000507207 168 ntBASIC1.45□□□□□ -2.18
PRKNO60260 SNORD45.4-201ENST00000516629 73 ntBASIC1.45□□□□□ -2.18
PRKNO60260 RNU7-149P-201ENST00000516739 59 ntBASIC1.45□□□□□ -2.18
PRKNO60260 RNU6-1212P-201ENST00000517023 104 ntBASIC1.45□□□□□ -2.18
PRKNO60260 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
PRKNO60260 DNAJC19P9-201ENST00000555084 351 ntBASIC1.45□□□□□ -2.18
PRKNO60260 MIR4778-201ENST00000577635 80 ntBASIC1.45□□□□□ -2.18
PRKNO60260 AL391903.3-201ENST00000612158 163 ntBASIC1.45□□□□□ -2.18
PRKNO60260 SNORD3E-202ENST00000627253 216 ntBASIC1.45□□□□□ -2.18
PRKNO60260 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
PRKNO60260 RNU6-103P-201ENST00000363686 107 ntBASIC1.44□□□□□ -2.18
PRKNO60260 snoU2-30.1-201ENST00000365012 70 ntBASIC1.44□□□□□ -2.18
PRKNO60260 Y_RNA.464-201ENST00000384282 110 ntBASIC1.44□□□□□ -2.18
PRKNO60260 MIR802-201ENST00000390235 94 ntBASIC1.44□□□□□ -2.18
PRKNO60260 SNORD72-201ENST00000390994 80 ntBASIC1.44□□□□□ -2.18
PRKNO60260 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AC093850.1-201ENST00000454121 251 ntBASIC1.44□□□□□ -2.18
PRKNO60260 CYCTP-201ENST00000504253 315 ntBASIC1.44□□□□□ -2.18
PRKNO60260 Y_RNA.797-201ENST00000515977 94 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.44□□□□□ -2.18
PRKNO60260 MRPS18CP4-201ENST00000535821 231 ntBASIC1.44□□□□□ -2.18
PRKNO60260 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.44□□□□□ -2.18
PRKNO60260 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
PRKNO60260 MIR4744-201ENST00000581563 82 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AC008507.4-201ENST00000585464 127 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AC108706.1-201ENST00000611053 297 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AL513423.1-201ENST00000621695 132 ntBASIC1.44□□□□□ -2.18
PRKNO60260 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
PRKNO60260 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
PRKNO60260 MIR424-201ENST00000362227 98 ntBASIC1.43□□□□□ -2.18
PRKNO60260 SNORD14E-201ENST00000364009 85 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-60P-201ENST00000364792 103 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-275P-201ENST00000364910 107 ntBASIC1.43□□□□□ -2.18
PRKNO60260 MIR660-201ENST00000385235 97 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-578P-201ENST00000390980 103 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-1228P-201ENST00000391014 107 ntBASIC1.43□□□□□ -2.18
PRKNO60260 AL603908.1-201ENST00000406098 201 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RPL30P13-201ENST00000418873 348 ntBASIC1.43□□□□□ -2.18
PRKNO60260 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-561P-201ENST00000516222 102 ntBASIC1.43□□□□□ -2.18
PRKNO60260 RNU6-255P-201ENST00000516957 105 ntBASIC1.43□□□□□ -2.18
PRKNO60260 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
PRKNO60260 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
PRKNO60260 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
PRKNO60260 Pinc.1-201ENST00000616452 154 ntBASIC1.43□□□□□ -2.18
PRKNO60260 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
PRKNO60260 Y_RNA.23-201ENST00000362496 106 ntBASIC1.42□□□□□ -2.18
PRKNO60260 Y_RNA.226-201ENST00000364337 114 ntBASIC1.42□□□□□ -2.18
PRKNO60260 Y_RNA.441-201ENST00000384123 112 ntBASIC1.42□□□□□ -2.18
PRKNO60260 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
PRKNO60260 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
PRKNO60260 MIR891A-201ENST00000401237 79 ntBASIC1.42□□□□□ -2.18
PRKNO60260 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC004965.1-201ENST00000413033 213 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
PRKNO60260 SNORD77.4-201ENST00000516158 81 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.42□□□□□ -2.18
PRKNO60260 SUMO2P16-201ENST00000519475 264 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC109810.1-201ENST00000534066 224 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.42□□□□□ -2.18
PRKNO60260 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC087685.1-201ENST00000587507 141 ntBASIC1.42□□□□□ -2.18
PRKNO60260 snoU13.31-201ENST00000607291 104 ntBASIC1.42□□□□□ -2.18
PRKNO60260 AC106754.2-201ENST00000623006 233 ntBASIC1.42□□□□□ -2.18
PRKNO60260 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PRKNO60260 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PRKNO60260 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
PRKNO60260 RNU6-1123P-201ENST00000362347 106 ntBASIC1.41□□□□□ -2.18
PRKNO60260 RNU6-312P-201ENST00000364629 107 ntBASIC1.41□□□□□ -2.18
PRKNO60260 RNU6-728P-201ENST00000365375 104 ntBASIC1.41□□□□□ -2.18
PRKNO60260 RNY3P5-201ENST00000384127 102 ntBASIC1.41□□□□□ -2.18
PRKNO60260 RNU6-1135P-201ENST00000411083 103 ntBASIC1.41□□□□□ -2.18
PRKNO60260 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
PRKNO60260 SEPT7P4-201ENST00000437076 306 ntBASIC1.41□□□□□ -2.18
PRKNO60260 AL121914.1-201ENST00000450188 156 ntBASIC1.41□□□□□ -2.18
PRKNO60260 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
PRKNO60260 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
PRKNO60260 RNU6-833P-201ENST00000363486 107 ntBASIC1.4□□□□□ -2.19
PRKNO60260 SNORD45.3-201ENST00000363836 72 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNU6-1138P-201ENST00000365359 106 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNU6-442P-201ENST00000383968 104 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNU6-804P-201ENST00000384286 107 ntBASIC1.4□□□□□ -2.19
PRKNO60260 MIR15B-201ENST00000385045 98 ntBASIC1.4□□□□□ -2.19
PRKNO60260 MIR30A-201ENST00000385092 71 ntBASIC1.4□□□□□ -2.19
PRKNO60260 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNU6-394P-201ENST00000410735 107 ntBASIC1.4□□□□□ -2.19
PRKNO60260 BTF3P4-201ENST00000418852 495 ntBASIC1.4□□□□□ -2.19
PRKNO60260 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms