Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MATN2O00339 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
MATN2O00339 MIR5197-201ENST00000583721 112 ntBASIC2.28□□□□□ -2.04
MATN2O00339 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
MATN2O00339 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
MATN2O00339 ZNF658B-202ENST00000615961 3375 ntBASIC2.27□□□□□ -2.05
MATN2O00339 RNU1-58P-201ENST00000362413 163 ntBASIC2.27□□□□□ -2.05
MATN2O00339 RNU6-880P-201ENST00000384526 107 ntBASIC2.27□□□□□ -2.05
MATN2O00339 RNA5SP136-201ENST00000410906 107 ntBASIC2.27□□□□□ -2.05
MATN2O00339 HMGN2P32-201ENST00000444648 269 ntBASIC2.27□□□□□ -2.05
MATN2O00339 SCARNA15-202ENST00000516881 127 ntBASIC2.27□□□□□ -2.05
MATN2O00339 MIR6715A-201ENST00000615929 79 ntBASIC2.27□□□□□ -2.05
MATN2O00339 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.27□□□□□ -2.05
MATN2O00339 MTND5P18-201ENST00000445624 1801 ntBASIC2.26□□□□□ -2.05
MATN2O00339 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
MATN2O00339 SNORD115-3-201ENST00000363100 82 ntBASIC2.26□□□□□ -2.05
MATN2O00339 RNU6-1189P-201ENST00000383958 107 ntBASIC2.26□□□□□ -2.05
MATN2O00339 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
MATN2O00339 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.26□□□□□ -2.05
MATN2O00339 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.26□□□□□ -2.05
MATN2O00339 AC069257.2-201ENST00000441819 155 ntBASIC2.26□□□□□ -2.05
MATN2O00339 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
MATN2O00339 SNORD45.4-201ENST00000516629 73 ntBASIC2.26□□□□□ -2.05
MATN2O00339 MIR3126-201ENST00000577443 74 ntBASIC2.26□□□□□ -2.05
MATN2O00339 AC069114.2-201ENST00000604699 304 ntBASIC2.26□□□□□ -2.05
MATN2O00339 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
MATN2O00339 SNORA28-201ENST00000606769 126 ntBASIC2.26□□□□□ -2.05
MATN2O00339 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.26□□□□□ -2.05
MATN2O00339 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
MATN2O00339 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
MATN2O00339 SNORD115-28-201ENST00000363931 81 ntBASIC2.25□□□□□ -2.05
MATN2O00339 RNU6-268P-201ENST00000364174 107 ntBASIC2.25□□□□□ -2.05
MATN2O00339 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.25□□□□□ -2.05
MATN2O00339 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.25□□□□□ -2.05
MATN2O00339 AC104984.5-201ENST00000586878 94 ntBASIC2.25□□□□□ -2.05
MATN2O00339 AC046143.2-201ENST00000609789 160 ntBASIC2.25□□□□□ -2.05
MATN2O00339 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
MATN2O00339 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.25□□□□□ -2.05
MATN2O00339 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
MATN2O00339 Y_RNA.35-201ENST00000362601 101 ntBASIC2.24□□□□□ -2.05
MATN2O00339 RNU6-1019P-201ENST00000364424 107 ntBASIC2.24□□□□□ -2.05
MATN2O00339 RNU1-91P-201ENST00000364746 163 ntBASIC2.24□□□□□ -2.05
MATN2O00339 SNORA2.2-201ENST00000365473 135 ntBASIC2.24□□□□□ -2.05
MATN2O00339 MIR548A1-201ENST00000385041 97 ntBASIC2.24□□□□□ -2.05
MATN2O00339 MIR1263-201ENST00000408324 86 ntBASIC2.24□□□□□ -2.05
MATN2O00339 SNRPGP14-201ENST00000435400 219 ntBASIC2.24□□□□□ -2.05
MATN2O00339 RPS26P48-201ENST00000491713 339 ntBASIC2.24□□□□□ -2.05
MATN2O00339 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
MATN2O00339 RNU7-25P-201ENST00000516544 62 ntBASIC2.24□□□□□ -2.05
MATN2O00339 AL137067.1-201ENST00000615933 120 ntBASIC2.24□□□□□ -2.05
MATN2O00339 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.24□□□□□ -2.05
MATN2O00339 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
MATN2O00339 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
MATN2O00339 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MATN2O00339 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MATN2O00339 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
MATN2O00339 Y_RNA.37-201ENST00000362606 108 ntBASIC2.23□□□□□ -2.05
MATN2O00339 Y_RNA.528-201ENST00000384575 108 ntBASIC2.23□□□□□ -2.05
MATN2O00339 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
MATN2O00339 RNA5SP109-201ENST00000391010 116 ntBASIC2.23□□□□□ -2.05
MATN2O00339 MIR1261-201ENST00000408659 82 ntBASIC2.23□□□□□ -2.05
MATN2O00339 AL606517.2-201ENST00000442855 241 ntBASIC2.23□□□□□ -2.05
MATN2O00339 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.23□□□□□ -2.05
MATN2O00339 RNA5SP137-201ENST00000516833 135 ntBASIC2.23□□□□□ -2.05
MATN2O00339 RNU7-70P-201ENST00000516941 66 ntBASIC2.23□□□□□ -2.05
MATN2O00339 IGKV1-22-201ENST00000524313 326 ntBASIC2.23□□□□□ -2.05
MATN2O00339 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
MATN2O00339 MIR8054-201ENST00000620877 86 ntBASIC2.23□□□□□ -2.05
MATN2O00339 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MATN2O00339 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
MATN2O00339 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MATN2O00339 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MATN2O00339 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
MATN2O00339 SNORA70B-201ENST00000384210 135 ntBASIC2.22□□□□□ -2.05
MATN2O00339 SNORD38C-201ENST00000384381 69 ntBASIC2.22□□□□□ -2.05
MATN2O00339 RNU1-148P-201ENST00000384472 162 ntBASIC2.22□□□□□ -2.05
MATN2O00339 RNU6-950P-201ENST00000384651 107 ntBASIC2.22□□□□□ -2.05
MATN2O00339 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MATN2O00339 RNU6-440P-201ENST00000390882 105 ntBASIC2.22□□□□□ -2.05
MATN2O00339 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
MATN2O00339 STAG3L5P-204ENST00000443759 179 ntBASIC2.22□□□□□ -2.05
MATN2O00339 AC087499.4-201ENST00000448505 178 ntBASIC2.22□□□□□ -2.05
MATN2O00339 COX6CP6-201ENST00000490840 228 ntBASIC2.22□□□□□ -2.05
MATN2O00339 RNU6-412P-201ENST00000516434 106 ntBASIC2.22□□□□□ -2.05
MATN2O00339 AC084364.2-201ENST00000546924 395 ntBASIC2.22□□□□□ -2.05
MATN2O00339 MIR1273D-201ENST00000577266 86 ntBASIC2.22□□□□□ -2.05
MATN2O00339 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
MATN2O00339 MIR376A2-201ENST00000636782 80 ntBASIC2.22□□□□□ -2.05
MATN2O00339 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.21□□□□□ -2.06
MATN2O00339 MIR4679-2-201ENST00000578358 77 ntBASIC2.21□□□□□ -2.06
MATN2O00339 MIR3613-201ENST00000579844 87 ntBASIC2.21□□□□□ -2.06
MATN2O00339 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
MATN2O00339 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MATN2O00339 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
MATN2O00339 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MATN2O00339 Y_RNA.366-201ENST00000365540 102 ntBASIC2.2□□□□□ -2.06
MATN2O00339 RNU6-147P-201ENST00000383983 107 ntBASIC2.2□□□□□ -2.06
MATN2O00339 RNU6-163P-201ENST00000384396 106 ntBASIC2.2□□□□□ -2.06
MATN2O00339 MIR570-201ENST00000384917 97 ntBASIC2.2□□□□□ -2.06
MATN2O00339 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms