Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 Y_RNA.528-201ENST00000384575 108 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 MIR520A-201ENST00000384862 85 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 MIR524-201ENST00000385242 87 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 RNU6-482P-201ENST00000391068 107 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 MIR1263-201ENST00000408324 86 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 RNU2-7P-201ENST00000410794 178 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 AL356320.1-201ENST00000429616 163 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
UPK3BL1B0FP48 AL391516.1-201ENST00000554380 2449 ntBASIC2.59□□□□□ -2
UPK3BL1B0FP48 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
UPK3BL1B0FP48 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
UPK3BL1B0FP48 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
UPK3BL1B0FP48 Y_RNA.35-201ENST00000362601 101 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 SNORA63.4-201ENST00000362763 126 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 RNU6-833P-201ENST00000363486 107 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 AL627390.1-201ENST00000396055 340 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 RN7SKP123-201ENST00000410732 291 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 RNU7-80P-201ENST00000459562 61 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 COX6CP6-201ENST00000490840 228 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 RNA5SP385-201ENST00000515947 110 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 RNA5SP481-201ENST00000516814 122 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 AP003484.1-201ENST00000530974 250 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 AC015712.3-201ENST00000559380 164 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
UPK3BL1B0FP48 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.57□□□□□ -2
UPK3BL1B0FP48 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 CALM2P4-201ENST00000430810 426 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 RNU7-70P-201ENST00000516941 66 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 SUB1P4-201ENST00000566062 339 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
UPK3BL1B0FP48 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK3BL1B0FP48 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
UPK3BL1B0FP48 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.56□□□□□ -2
UPK3BL1B0FP48 RNU6-349P-201ENST00000362402 107 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 Y_RNA.366-201ENST00000365540 102 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 Y_RNA.454-201ENST00000384224 113 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 MIR548A1-201ENST00000385041 97 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 RN7SKP223-201ENST00000410582 62 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.56□□□□□ -2
UPK3BL1B0FP48 AL603825.1-201ENST00000438481 80 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 SNORD36C-201ENST00000516733 66 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 MIR4778-201ENST00000577635 80 ntBASIC2.56□□□□□ -2
UPK3BL1B0FP48 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.56□□□□□ -2
UPK3BL1B0FP48 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
UPK3BL1B0FP48 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
UPK3BL1B0FP48 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK3BL1B0FP48 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK3BL1B0FP48 RNU6-424P-201ENST00000384367 105 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 MIR570-201ENST00000384917 97 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.55□□□□□ -2
UPK3BL1B0FP48 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.55□□□□□ -2
UPK3BL1B0FP48 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 RNU6-412P-201ENST00000516434 106 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 RNU6-1116P-201ENST00000517269 99 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 AC015726.2-201ENST00000620112 122 ntBASIC2.55□□□□□ -2
UPK3BL1B0FP48 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UPK3BL1B0FP48 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 RNU1-133P-201ENST00000364867 167 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 RNU6-1031P-201ENST00000384773 107 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 AC015922.2-201ENST00000435593 184 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.54□□□□□ -2
UPK3BL1B0FP48 AC108210.2-201ENST00000503681 201 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 RNVU1-2-201ENST00000516326 135 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 RNA5SP168-201ENST00000516642 112 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 SNORA18.7-201ENST00000516910 131 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 SNORA31.25-201ENST00000517242 134 ntBASIC2.54□□□□□ -2
UPK3BL1B0FP48 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
UPK3BL1B0FP48 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UPK3BL1B0FP48 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 Y_RNA.281-201ENST00000364774 94 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 Y_RNA.351-201ENST00000365436 96 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 RNY1P6-201ENST00000384193 109 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 U8.16-201ENST00000391279 133 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 RNA5SP501-201ENST00000410990 112 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 HSPE1P9-201ENST00000440046 311 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 RNU6-240P-201ENST00000516098 97 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.53□□□□□ -2
UPK3BL1B0FP48 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 Y_RNA.198-201ENST00000364013 98 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 RNU6-690P-201ENST00000365242 106 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 U8.9-201ENST00000365667 134 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 AL591806.2-201ENST00000433122 173 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 MIR1273D-201ENST00000577266 86 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 MIR4679-2-201ENST00000578358 77 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 AC245884.12-201ENST00000615364 59 ntBASIC2.52□□□□□ -2.01
UPK3BL1B0FP48 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UPK3BL1B0FP48 RNA5SP450-201ENST00000411206 102 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms