Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 AC015688.6-201ENST00000577737 104 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 AC098479.1-201ENST00000609225 154 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 AC006441.5-201ENST00000612680 209 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.150-201ENST00000363562 102 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.240-201ENST00000364469 95 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 MIR526A1-201ENST00000384897 85 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 MIR548O-201ENST00000408583 114 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 RNU4-43P-201ENST00000410628 137 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 SNRPGP14-201ENST00000435400 219 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 SEPT7P4-201ENST00000437076 306 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 SNRPGP13-201ENST00000442212 177 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 AC092991.1-201ENST00000477176 376 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 AC090255.1-201ENST00000495779 349 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 RNA5SP153-201ENST00000516498 76 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 AC090142.3-201ENST00000519012 385 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 FAM106DP-201ENST00000586416 501 ntBASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 RNU4-52P-201ENST00000384209 138 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 MIR136-201ENST00000385207 82 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-322P-201ENST00000516010 103 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-917P-201ENST00000516294 104 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 RNU7-25P-201ENST00000516544 62 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 MIR4431-201ENST00000579990 94 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 AL365434.2-201ENST00000607979 234 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 FTX_2.1-201ENST00000618816 94 ntBASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MBD3L4A6NDZ8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 AC025033.1-201ENST00000463883 194 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 AC074198.2-201ENST00000508153 258 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-504P-201ENST00000516568 104 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 AL160236.1-201ENST00000556317 195 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 ZNF720P1-201ENST00000562403 1939 ntBASIC1.73□□□□□ -2.13
MBD3L4A6NDZ8 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 SNORA2.2-201ENST00000365473 135 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 AL451046.2-201ENST00000403074 277 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 AC079140.2-201ENST00000506193 142 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 AC107027.2-201ENST00000512197 115 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-922P-201ENST00000516753 99 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 AC097639.2-201ENST00000603159 172 ntBASIC1.72□□□□□ -2.13
MBD3L4A6NDZ8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 AC005336.3-201ENST00000623833 2679 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 SNORD24-201ENST00000383884 75 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 SNORD61-201ENST00000384252 73 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 MT-TR-201ENST00000387439 65 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 MIR4498-201ENST00000577599 66 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 MIR378D2-201ENST00000580636 98 ntBASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.521-201ENST00000384560 114 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.555-201ENST00000384673 110 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 AC108667.1-201ENST00000428618 249 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 SNORD116-25-201ENST00000516517 92 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 SNORA18.7-201ENST00000516910 131 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 AC090049.2-201ENST00000550377 109 ntBASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MBD3L4A6NDZ8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-888P-201ENST00000363010 101 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 SNX2P2-201ENST00000424553 323 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 RNU1-40P-201ENST00000516816 164 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 RNU1-97P-201ENST00000516872 164 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 AC002984.1-201ENST00000591692 448 ntBASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
MBD3L4A6NDZ8 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 RNA5SP37-201ENST00000365420 130 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-886P-201ENST00000384319 105 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 MIR548A2-201ENST00000384956 97 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 MIR518F-201ENST00000384973 87 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 AC005840.1-201ENST00000498412 377 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms