Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 SNORD33.1-201ENST00000516213 88 ntBASIC2.82□□□□□ -1.96
SNCAIPQ9Y6H5 RNU6-781P-201ENST00000516377 101 ntBASIC2.82□□□□□ -1.96
SNCAIPQ9Y6H5 MIR3126-201ENST00000577443 74 ntBASIC2.82□□□□□ -1.96
SNCAIPQ9Y6H5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SNCAIPQ9Y6H5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 SNORD14E-201ENST00000364009 85 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 MIR548A2-201ENST00000384956 97 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 RNA5SP109-201ENST00000391010 116 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 SNORD77.3-201ENST00000391113 65 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 Y_RNA.617-201ENST00000410920 90 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 AL603825.1-201ENST00000438481 80 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 AL606517.2-201ENST00000442855 241 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 Y_RNA.651-201ENST00000459380 103 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 RN7SKP19-201ENST00000516016 252 ntBASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNCAIPQ9Y6H5 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 SNORA22-201ENST00000383907 134 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 RNU6-442P-201ENST00000383968 104 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 MIR548A3-201ENST00000385297 97 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AL021397.1-201ENST00000451806 248 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AC108210.2-201ENST00000503681 201 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 RNU6-1149P-201ENST00000516810 97 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 Y_RNA.709-201ENST00000516952 92 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 MIR5194-201ENST00000582634 120 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AL670379.3-201ENST00000605040 251 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AL121890.5-201ENST00000620848 304 ntBASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNCAIPQ9Y6H5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 MIR518F-201ENST00000384973 87 ntBASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 SNORD45.4-201ENST00000516629 73 ntBASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 FO624990.1-201ENST00000636373 85 ntBASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.79□□□□□ -1.96
SNCAIPQ9Y6H5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 MIR524-201ENST00000385242 87 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 MIR548O-201ENST00000408583 114 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 BX510359.4-201ENST00000423750 193 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 AC025166.1-201ENST00000612411 163 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 AC022513.1-201ENST00000624512 117 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 AP006437.1-201ENST00000641440 3685 ntBASIC2.78□□□□□ -1.96
SNCAIPQ9Y6H5 RNU1-58P-201ENST00000362413 163 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 Y_RNA.346-201ENST00000365385 112 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 MIR29C-201ENST00000385231 88 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 RNA5SP482-201ENST00000391269 118 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 MIR1263-201ENST00000408324 86 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 RNA5SP236-201ENST00000516169 116 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 MIR4762-201ENST00000585261 75 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 AC005786.1-201ENST00000588553 154 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNCAIPQ9Y6H5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 RNA5SP393-201ENST00000363423 117 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 RNU6-482P-201ENST00000391068 107 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 RNU6-589P-201ENST00000516485 107 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 RNU7-25P-201ENST00000516544 62 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 AC084364.2-201ENST00000546924 395 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 AC006441.5-201ENST00000612680 209 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 AC134878.1-201ENST00000619901 243 ntBASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.76□□□□□ -1.97
SNCAIPQ9Y6H5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNA5SP99-201ENST00000364020 114 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNU6-268P-201ENST00000364174 107 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 U8.5-201ENST00000364528 136 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 SNORA67.1-201ENST00000364749 141 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNU1-148P-201ENST00000384472 162 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 SNORD116-21-201ENST00000384507 92 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 MIR548A1-201ENST00000385041 97 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNU6-440P-201ENST00000390882 105 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNU11-3P-201ENST00000391111 133 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 STAG3L5P-204ENST00000443759 179 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 RNU7-28P-201ENST00000516759 62 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 SCARNA15-202ENST00000516881 127 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 IGKV1-22-201ENST00000524313 326 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 MIR5094-201ENST00000578766 85 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 MIR376A2-201ENST00000636782 80 ntBASIC2.75□□□□□ -1.97
SNCAIPQ9Y6H5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 Y_RNA.649-201ENST00000459077 103 ntBASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 MIR5197-201ENST00000583721 112 ntBASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 AC069114.2-201ENST00000604699 304 ntBASIC2.74□□□□□ -1.97
SNCAIPQ9Y6H5 MIR8054-201ENST00000620877 86 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms