Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC106754.2-201ENST00000623006 233 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 RNU6-1084P-201ENST00000362498 107 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 U8.5-201ENST00000364528 136 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 SNORA2.2-201ENST00000365473 135 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 MIR1262-201ENST00000408276 93 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 HMGN2P3-201ENST00000433603 273 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 HMGN2P5-201ENST00000436882 273 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 AC104389.3-201ENST00000445629 235 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 RNU6-537P-201ENST00000517277 103 ntBASIC3.15□□□□□ -1.91
RTCBQ9Y3I0 RNU6-862P-201ENST00000362804 105 ntBASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 RNU6-240P-201ENST00000516098 97 ntBASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.14□□□□□ -1.91
RTCBQ9Y3I0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 SNORD115-28-201ENST00000363931 81 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 RNU6-268P-201ENST00000364174 107 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.549-201ENST00000384657 102 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 RNU6-482P-201ENST00000391068 107 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 AC099677.2-201ENST00000436385 175 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 RNA5SP281-201ENST00000516504 135 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 RNU7-25P-201ENST00000516544 62 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 AC046143.2-201ENST00000609789 160 ntBASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RTCBQ9Y3I0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.198-201ENST00000364013 98 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 RNA5SP493-201ENST00000364115 91 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 RNA5SP482-201ENST00000391269 118 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 SNRPGP14-201ENST00000435400 219 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 AC009831.4-201ENST00000620744 325 ntBASIC3.12□□□□□ -1.91
RTCBQ9Y3I0 ZNF720P1-201ENST00000562403 1939 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 SNORD114-1-201ENST00000362705 72 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 RNU6-690P-201ENST00000365242 106 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.369-201ENST00000365568 117 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 MIR1302-5-201ENST00000408164 150 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 SNORD45.4-201ENST00000516629 73 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 RNU7-70P-201ENST00000516941 66 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 AC103810.6-201ENST00000606708 136 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.11□□□□□ -1.91
RTCBQ9Y3I0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNU6-766P-201ENST00000362478 107 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.49-201ENST00000362714 112 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.163-201ENST00000363702 113 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNA5SP456-201ENST00000364002 114 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 Y_RNA.336-201ENST00000365307 109 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNY4P30-201ENST00000410216 95 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 AL445646.1-201ENST00000431784 216 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 AL603825.1-201ENST00000438481 80 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RPS12P2-201ENST00000439728 269 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNU7-28P-201ENST00000516759 62 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNU6-56P-201ENST00000516986 93 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 AC245060.5-201ENST00000610778 3293 ntBASIC3.1□□□□□ -1.91
RTCBQ9Y3I0 RNU6-349P-201ENST00000362402 107 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 RNY4P6-201ENST00000363667 96 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 RNU6-756P-201ENST00000383997 107 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 MIR759-201ENST00000390224 91 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 AC245047.3-201ENST00000429428 127 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 AL449363.1-201ENST00000617815 186 ntBASIC3.09□□□□□ -1.91
RTCBQ9Y3I0 AL589743.1-201ENST00000551932 2712 ntBASIC3.09□□□□□ -1.92
RTCBQ9Y3I0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RTCBQ9Y3I0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 RNU6-23P-201ENST00000363283 107 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.213-201ENST00000364178 111 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.265-201ENST00000364677 108 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 SNORA80E-201ENST00000384744 137 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 RNY4P20-201ENST00000516678 93 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 SNORD36C-201ENST00000516733 66 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 MIR3169-201ENST00000578032 83 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 AL035470.1-201ENST00000622571 220 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 MIR1291-201ENST00000627649 87 ntBASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RTCBQ9Y3I0 SNORA63.5-201ENST00000363548 123 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 RNU1-133P-201ENST00000364867 167 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.328-201ENST00000365208 113 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 RNU6-1014P-201ENST00000383940 103 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.440-201ENST00000384120 114 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 SNORA51.5-201ENST00000384126 131 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms