Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
SSX2IPQ9Y2D8 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
SSX2IPQ9Y2D8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SSX2IPQ9Y2D8 RNU4-84P-201ENST00000364200 139 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 Y_RNA.242-201ENST00000364473 110 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 Y_RNA.272-201ENST00000364696 102 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 RNU6-440P-201ENST00000390882 105 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 RNU2-7P-201ENST00000410794 178 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 RNU5E-9P-201ENST00000411164 104 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 RPL31P63-201ENST00000422565 375 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 FTH1P12-201ENST00000432137 551 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 SNRPGP8-201ENST00000454064 226 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 OR9P1P-201ENST00000496431 281 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AC107027.2-201ENST00000512197 115 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 RNU6-1053P-201ENST00000515930 101 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 SNORD77.4-201ENST00000516158 81 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 MIR3144-201ENST00000579460 79 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AC104465.1-201ENST00000611365 139 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 AL591926.4-201ENST00000616895 298 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
SSX2IPQ9Y2D8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 SNORD45.3-201ENST00000363836 72 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-1138P-201ENST00000365359 106 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-643P-201ENST00000384018 107 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-239P-201ENST00000390990 99 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.580-201ENST00000391004 95 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-131P-201ENST00000391144 107 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 MIR1287-201ENST00000408492 90 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RN7SKP200-201ENST00000410564 320 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.622-201ENST00000411091 108 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-561P-201ENST00000516222 102 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-1299P-201ENST00000516316 100 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 MIR4662B-201ENST00000579498 81 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 AL365434.2-201ENST00000607979 234 ntBASIC2.02□□□□□ -2.09
SSX2IPQ9Y2D8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.432-201ENST00000384087 111 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 MIR522-201ENST00000385071 87 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 MIR548M-201ENST00000408260 86 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 SUMO1P3-201ENST00000439961 304 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 RNU7-149P-201ENST00000516739 59 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-255P-201ENST00000516957 105 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 AL160236.1-201ENST00000556317 195 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 MIR3683-201ENST00000580847 82 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 AC021753.1-201ENST00000635724 168 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SSX2IPQ9Y2D8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 SNORD68-201ENST00000363214 84 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-804P-201ENST00000384286 107 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 SNORA26-201ENST00000391286 122 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 NDUFA4P2-201ENST00000489989 244 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 RPL23AP63-201ENST00000498752 471 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP153-201ENST00000516498 76 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP481-201ENST00000516814 122 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 Pinc.1-201ENST00000616452 154 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 MTND1P7-201ENST00000632801 297 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.337-201ENST00000365312 102 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-449P-201ENST00000383914 107 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-484P-201ENST00000384016 107 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-746P-201ENST00000384112 109 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 AL034345.1-201ENST00000407768 123 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 AC006461.1-201ENST00000412637 326 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 SNORA31.10-201ENST00000516482 106 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU7-121P-201ENST00000516604 62 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-197P-201ENST00000516680 100 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 MIR4781-201ENST00000585250 76 ntBASIC1.99□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 RNU2-70P-201ENST00000410718 179 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP100-201ENST00000410903 110 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP59-201ENST00000410922 110 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms