Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC023141.4-201ENST00000412031 328 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 FTH1P12-201ENST00000432137 551 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 AL450471.1-201ENST00000447509 127 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 RN7SL20P-201ENST00000488827 297 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 SNORD19.2-201ENST00000516978 73 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AP003122.5-201ENST00000527668 3766 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 MIR126-201ENST00000362291 85 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 SNORD31B-201ENST00000364977 69 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 RNA5SP184-201ENST00000411071 108 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AC022018.1-201ENST00000430685 241 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 UQCRHP3-201ENST00000451503 251 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AC233266.1-201ENST00000454518 96 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 UBL5P1-201ENST00000507979 193 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 RNU7-153P-201ENST00000516455 62 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AC242852.1-201ENST00000612151 96 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 AC244015.1-201ENST00000622301 99 ntBASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDZRN3Q9UPQ7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 MIR22-201ENST00000362190 85 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 MIR522-201ENST00000385071 87 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 SNRPGP14-201ENST00000435400 219 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 SNORA25.13-201ENST00000516395 103 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 AC021613.1-201ENST00000623880 111 ntBASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PDZRN3Q9UPQ7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-624P-201ENST00000363411 107 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-1244P-201ENST00000363614 108 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-268P-201ENST00000364174 107 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 SNX2P2-201ENST00000424553 323 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 AC105272.1-201ENST00000438604 198 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 AC107016.2-201ENST00000547968 190 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDZRN3Q9UPQ7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 AC096644.4-201ENST00000563417 2912 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 MIR342-201ENST00000362212 99 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 Y_RNA.171-201ENST00000363760 102 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 MIR802-201ENST00000390235 94 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 SNORD67-201ENST00000390833 111 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 SNORD77B-201ENST00000391112 67 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 AL135938.1-201ENST00000443141 297 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 AL441985.1-201ENST00000457727 251 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-1258P-201ENST00000516911 111 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 MIR3609-201ENST00000582661 80 ntBASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.84□□□□□ -1.79
PDZRN3Q9UPQ7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDZRN3Q9UPQ7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PDZRN3Q9UPQ7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDZRN3Q9UPQ7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 AC073325.2-201ENST00000339545 159 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 SNORD115-39-201ENST00000363694 82 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 RNA5SP139-201ENST00000364340 117 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-296P-201ENST00000384608 107 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 RPL36AP48-201ENST00000485521 314 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 Y_RNA.714-201ENST00000517065 90 ntBASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDZRN3Q9UPQ7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 MAPK10-322ENST00000641485 4530 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 MIRLET7A1-201ENST00000362295 80 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 SNORD115-2-201ENST00000362842 82 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 SNORD115-20-201ENST00000365099 82 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-234P-201ENST00000365229 104 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-649P-201ENST00000384463 107 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 AL627390.1-201ENST00000396055 340 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 AC087499.4-201ENST00000448505 178 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-634P-201ENST00000459134 106 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 AC112771.1-201ENST00000463581 102 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 MIR548AE2-201ENST00000583456 67 ntBASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-442P-201ENST00000383968 104 ntBASIC3.81□□□□□ -1.8
PDZRN3Q9UPQ7 RNU6-800P-201ENST00000384473 103 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms