Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNA5SP38-201ENST00000410750 119 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 AC245047.3-201ENST00000429428 127 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 RPS29P29-201ENST00000456396 171 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 BX510359.1-201ENST00000456973 237 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 SNORD67.1-201ENST00000516618 108 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 MIR4425-201ENST00000580572 84 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 MIR3944-201ENST00000581277 108 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 MIR635-201ENST00000384830 98 ntBASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 ATP5J2P3-201ENST00000451550 258 ntBASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 RN7SL601P-201ENST00000471221 293 ntBASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 SEM1P1-201ENST00000506694 209 ntBASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 MIR2682-201ENST00000580305 110 ntBASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TRIM35Q9UPQ4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 MIR423-201ENST00000362201 94 ntBASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 SNORA24-201ENST00000384096 131 ntBASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 RNA5SP252-201ENST00000391131 119 ntBASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 Y_RNA.596-201ENST00000410462 109 ntBASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 AC002546.1-201ENST00000588041 2504 ntBASIC4.29□□□□□ -1.72
TRIM35Q9UPQ4 Y_RNA.98-201ENST00000363109 102 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNU1-105P-201ENST00000363470 161 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-663P-201ENST00000391105 106 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-602P-201ENST00000411155 105 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RHEBP3-201ENST00000411920 351 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 CST2P1-201ENST00000425770 87 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 AC245047.7-201ENST00000440265 293 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNU7-73P-201ENST00000458743 63 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNU7-48P-201ENST00000458875 63 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RN7SL636P-201ENST00000497504 294 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 uc_338.1-201ENST00000612113 180 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 RNVU1-4-201ENST00000612985 164 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 MIR664A-201ENST00000626086 82 ntBASIC4.28□□□□□ -1.72
TRIM35Q9UPQ4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 MIRLET7C-201ENST00000362160 84 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 SNORD114-10-201ENST00000363409 72 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 MIR9-2-201ENST00000384838 87 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 RNU2-58P-201ENST00000516403 183 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 SCARNA20.6-201ENST00000517251 106 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 AL512598.1-201ENST00000610158 273 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 AC091152.2-201ENST00000591628 2569 ntBASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM35Q9UPQ4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 RNU6-913P-201ENST00000390913 95 ntBASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 AC006483.1-201ENST00000487308 313 ntBASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 MIR3651-201ENST00000630427 90 ntBASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM35Q9UPQ4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 MIR184-201ENST00000384962 84 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 AL606517.2-201ENST00000442855 241 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 STAG3L5P-204ENST00000443759 179 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 AC115115.1-201ENST00000449927 248 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 RNU7-85P-201ENST00000458851 63 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 SCARNA17.1-201ENST00000516211 143 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 SCARNA17.2-201ENST00000516334 143 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 RNU7-137P-201ENST00000516788 62 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 MIR5680-201ENST00000577577 84 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 SCARNA17.4-201ENST00000614296 143 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 MIR8066-201ENST00000617280 78 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 AC105081.1-201ENST00000617727 106 ntBASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM35Q9UPQ4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 RNU1-23P-201ENST00000363361 144 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 MIR520H-201ENST00000385126 88 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 Z98941.1-201ENST00000407764 100 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 RNU2-48P-201ENST00000410694 191 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 RNU6-1086P-201ENST00000410930 100 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 AP001362.1-201ENST00000625165 124 ntBASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM35Q9UPQ4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 SNORA9-201ENST00000384215 133 ntBASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 RNU6-1241P-201ENST00000384536 107 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms