Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 SNORD50.2-201ENST00000365465 70 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 Y_RNA.400-201ENST00000383963 111 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RNU6-1186P-201ENST00000410429 97 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RN7SKP101-201ENST00000411376 320 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 AC107027.2-201ENST00000512197 115 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP481-201ENST00000516814 122 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 AC084364.2-201ENST00000546924 395 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RNU6-112P-201ENST00000363599 104 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNU6-151P-201ENST00000364158 107 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNU6-950P-201ENST00000384651 107 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 MIR15B-201ENST00000385045 98 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP496-201ENST00000391240 109 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 SNORD116-25-201ENST00000516517 92 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 RNU7-128P-201ENST00000517247 62 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC011604.1-201ENST00000545978 196 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC073413.2-201ENST00000604332 360 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AL021707.8-201ENST00000609428 183 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 Y_RNA.778-201ENST00000620203 90 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC132825.6-201ENST00000638861 357 ntBASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SCAF8Q9UPN6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
SCAF8Q9UPN6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 SNORA63D-201ENST00000364359 132 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 RNU6-728P-201ENST00000365375 104 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 RNY3P5-201ENST00000384127 102 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 AC006461.1-201ENST00000412637 326 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCAF8Q9UPN6 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.215-201ENST00000364204 112 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 RNU6-643P-201ENST00000384018 107 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 FTH1P12-201ENST00000432137 551 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 AC245047.4-201ENST00000433189 144 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 U6.108-201ENST00000637764 58 ntBASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCAF8Q9UPN6 AC100821.1-201ENST00000523153 2479 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 RNU6-131P-201ENST00000391144 107 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 RNU4-43P-201ENST00000410628 137 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 SNRPGP8-201ENST00000454064 226 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AL163195.1-201ENST00000496941 348 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AC091178.2-201ENST00000584401 117 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AL049861.1-201ENST00000603130 150 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 AP001485.1-201ENST00000604799 199 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 MIR3658-201ENST00000636291 56 ntBASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SCAF8Q9UPN6 RNY1P10-201ENST00000363268 113 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 SNORD45.3-201ENST00000363836 72 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RNU6-296P-201ENST00000384608 107 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RNU6-360P-201ENST00000390944 104 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 RPL23AP91-201ENST00000569211 455 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 MIR2681-201ENST00000581814 105 ntBASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.224-201ENST00000364308 111 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 RNU4-11P-201ENST00000365287 132 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 SNORD113-1-201ENST00000365321 69 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms