Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 RPL23AP54-201ENST00000495129 419 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.715-201ENST00000517082 110 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 MIR4300-201ENST00000581016 96 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AC087685.1-201ENST00000587507 141 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AC104695.3-201ENST00000604052 296 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AL160413.1-201ENST00000622780 310 ntBASIC0.81□□□□□ -2.28
UBQLN1Q9UMX0 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.136-201ENST00000363444 102 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-674P-201ENST00000363831 107 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.418-201ENST00000384029 102 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.445-201ENST00000384168 102 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 SNORD115-46-201ENST00000390982 71 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-823P-201ENST00000391042 103 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU2-14P-201ENST00000411053 191 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 SNRPGP14-201ENST00000435400 219 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 POLR2KP2-201ENST00000438155 177 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-496P-201ENST00000516145 99 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-191P-201ENST00000516295 94 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 MIR4764-201ENST00000580680 88 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 AC124312.5-201ENST00000604451 268 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 RAC1P9-201ENST00000604990 392 ntBASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.8□□□□□ -2.28
UBQLN1Q9UMX0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNA5SP264-201ENST00000363115 107 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 SNORD113-8-201ENST00000363497 74 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-102P-201ENST00000384485 104 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 MIR520C-201ENST00000385005 87 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 MIR1252-201ENST00000408861 65 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 HSPE1P25-201ENST00000455484 251 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNU7-141P-201ENST00000459304 62 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-897P-201ENST00000517135 105 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 MIR376A1-201ENST00000616574 68 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 AC007742.2-201ENST00000618226 398 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 AC090574.1-201ENST00000623186 233 ntBASIC0.79□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-1048P-201ENST00000364054 107 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU5E-4P-201ENST00000364931 120 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-1248P-201ENST00000391096 64 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 SNORA26.5-201ENST00000391215 123 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 SNORA36B-201ENST00000410438 131 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU6-437P-201ENST00000459408 95 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 RNU7-43P-201ENST00000516554 64 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 SNORA18.7-201ENST00000516910 131 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 DEFB108E-201ENST00000524692 240 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.28
UBQLN1Q9UMX0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.105-201ENST00000363182 111 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.128-201ENST00000363391 112 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 SNORD14E-201ENST00000364009 85 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-867P-201ENST00000364956 107 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.460-201ENST00000384255 102 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.535-201ENST00000384612 99 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.631-201ENST00000459607 101 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 RN7SKP164-201ENST00000516138 266 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-397P-201ENST00000516226 104 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-830P-201ENST00000516353 107 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 MIR2681-201ENST00000581814 105 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 AC008507.4-201ENST00000585464 127 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 AC005357.1-201ENST00000588399 301 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 JPX_2.1-201ENST00000614161 69 ntBASIC0.77□□□□□ -2.29
UBQLN1Q9UMX0 RNU4-90P-201ENST00000362773 141 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.61-201ENST00000362835 102 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 SNORA25.3-201ENST00000363205 127 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-450P-201ENST00000364654 107 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 MIR200A-201ENST00000384875 90 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 Y_RNA.581-201ENST00000391017 97 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 MIR1185-1-201ENST00000408598 86 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-121P-201ENST00000410525 99 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 SNORD11-201ENST00000459124 84 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 RNU7-90P-201ENST00000459216 62 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 RNU6-764P-201ENST00000516396 105 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.76□□□□□ -2.29
UBQLN1Q9UMX0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 793.5 ms