| MAFF | Q9ULX9 | Y_RNA.121-201 | ENST00000363309 | 113 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.272-201 | ENST00000364696 | 102 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.506-201 | ENST00000384494 | 102 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-125P-201 | ENST00000384505 | 107 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNORD72-201 | ENST00000390994 | 80 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNRPGP10-201 | ENST00000432323 | 225 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU2-56P-201 | ENST00000516826 | 190 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR4285-201 | ENST00000581001 | 85 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AC069114.2-201 | ENST00000604699 | 304 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.464-201 | ENST00000384282 | 110 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AL603908.1-201 | ENST00000406098 | 201 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-103P-201 | ENST00000363686 | 107 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNY1P11-201 | ENST00000363759 | 113 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-440P-201 | ENST00000390882 | 105 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AL353743.2-204 | ENST00000456242 | 419 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | HMGN1P7-201 | ENST00000491722 | 313 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RPL23AP63-201 | ENST00000498752 | 471 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AC024995.1-201 | ENST00000523014 | 93 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR8054-201 | ENST00000620877 | 86 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AC025539.1-201 | ENST00000515343 | 4019 nt | TSL 2 BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.23-201 | ENST00000362496 | 106 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU4-84P-201 | ENST00000364200 | 139 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-1019P-201 | ENST00000364424 | 107 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.441-201 | ENST00000384123 | 112 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR9-3-201 | ENST00000385084 | 90 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNORA48.1-201 | ENST00000390879 | 135 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNORA67.5-201 | ENST00000391036 | 107 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR548M-201 | ENST00000408260 | 86 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | PTPN22-206 | ENST00000525799 | 2118 nt | TSL 1 (best) BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-151P-201 | ENST00000364158 | 107 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-312P-201 | ENST00000364629 | 107 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.265-201 | ENST00000364677 | 108 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-728P-201 | ENST00000365375 | 104 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.357-201 | ENST00000365487 | 109 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR522-201 | ENST00000385071 | 87 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR30A-201 | ENST00000385092 | 71 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU7-200P-201 | ENST00000516105 | 62 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SNORD116-25-201 | ENST00000516517 | 92 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | AP002004.2-201 | ENST00000531656 | 154 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | SUB1P4-201 | ENST00000566062 | 339 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | MIR4431-201 | ENST00000579990 | 94 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 1.9 | □□□□□ -2.1 | | |
| MAFF | Q9ULX9 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORD50B-201 | ENST00000364995 | 70 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-643P-201 | ENST00000384018 | 107 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNA5SP496-201 | ENST00000391240 | 109 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | CALM2P4-201 | ENST00000430810 | 426 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-1212P-201 | ENST00000517023 | 104 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | Pinc.1-201 | ENST00000616452 | 154 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.9 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-768P-201 | ENST00000384683 | 107 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNA5SP100-201 | ENST00000410903 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNA5SP59-201 | ENST00000410922 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-717P-201 | ENST00000459076 | 104 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | MIR3122-201 | ENST00000577243 | 73 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.89 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | XIRP2-201 | ENST00000295237 | 5246 nt | TSL 2 BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SLC9C2-201 | ENST00000367714 | 4428 nt | APPRIS P1 TSL 1 (best) BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORA16.1-201 | ENST00000364597 | 132 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORA20-201 | ENST00000384662 | 132 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| MAFF | Q9ULX9 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 1.88 | □□□□□ -2.11 | | |