Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AF228730.3-201ENST00000436691 102 ntBASIC2.96□□□□□ -1.94
BRPF3Q9ULD4 MTATP6P21-201ENST00000440681 189 ntBASIC2.96□□□□□ -1.94
BRPF3Q9ULD4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
BRPF3Q9ULD4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRPF3Q9ULD4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 Y_RNA.81-201ENST00000362997 102 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 SNRPGP14-201ENST00000435400 219 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 RPS27P21-201ENST00000486977 252 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 RNU6-772P-201ENST00000516042 105 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 RNVU1-2-201ENST00000516326 135 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 AC006023.1-201ENST00000603944 259 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRPF3Q9ULD4 ICE2P2-201ENST00000483823 2787 ntBASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 RNA5SP68-201ENST00000363885 119 ntBASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 RNU7-25P-201ENST00000516544 62 ntBASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 MIR514B-201ENST00000516774 80 ntBASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 AL022345.2-201ENST00000606307 135 ntBASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
BRPF3Q9ULD4 RNU6-834P-201ENST00000362367 110 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 SNORA63D-201ENST00000364359 132 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 RNU6-215P-201ENST00000365169 102 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 MIR196B-201ENST00000384852 84 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 SNORA48.1-201ENST00000390879 135 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 RN7SKP200-201ENST00000410564 320 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 HSPE1P9-201ENST00000440046 311 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 HMGN2P32-201ENST00000444648 269 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 MIR6817-201ENST00000615588 66 ntBASIC2.93□□□□□ -1.94
BRPF3Q9ULD4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 RNU6-647P-201ENST00000364243 107 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AC114811.1-201ENST00000507207 168 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 RNA5SP236-201ENST00000516169 116 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 RNA5SP148-201ENST00000516527 94 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AC133485.4-201ENST00000561835 220 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AC138907.4-201ENST00000570107 226 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AC134878.1-201ENST00000619901 243 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 U1.36-201ENST00000620684 176 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
BRPF3Q9ULD4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 MIRLET7C-201ENST00000362160 84 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 RNU6-163P-201ENST00000384396 106 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 RNU6-950P-201ENST00000384651 107 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 AL034345.1-201ENST00000407768 123 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 CYCTP-201ENST00000504253 315 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 MIR5197-201ENST00000583721 112 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 MIR376A2-201ENST00000636782 80 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 MIR3914-2-201ENST00000637339 95 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 AL365361.1-201ENST00000566942 3481 ntBASIC2.91□□□□□ -1.94
BRPF3Q9ULD4 MIR21-201ENST00000362134 72 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 SNORD115-28-201ENST00000363931 81 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 SNORA4.2-201ENST00000365313 147 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 RNU6-1056P-201ENST00000383996 107 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 RNA5SP501-201ENST00000410990 112 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 AL356379.1-201ENST00000414105 126 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 SCARNA15-202ENST00000516881 127 ntBASIC2.9□□□□□ -1.95
BRPF3Q9ULD4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 RNU6-1325P-201ENST00000364905 105 ntBASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 MIR520A-201ENST00000384862 85 ntBASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 RNA5SP338-201ENST00000410495 85 ntBASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 SUB1P4-201ENST00000566062 339 ntBASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 AL627230.6-201ENST00000611129 280 ntBASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRPF3Q9ULD4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AL596028.1-201ENST00000326971 197 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 MIR23A-201ENST00000385245 73 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 HMGN2P38-201ENST00000423806 265 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 CALM2P4-201ENST00000430810 426 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AL445646.1-201ENST00000431784 216 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AL021397.1-201ENST00000451806 248 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AC015726.2-201ENST00000620112 122 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 AC027279.3-201ENST00000625055 122 ntBASIC2.88□□□□□ -1.95
BRPF3Q9ULD4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms