Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC006461.1-201ENST00000412637 326 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DKK3Q9UBP4 OR9P1P-201ENST00000496431 281 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 MIR4662B-201ENST00000579498 81 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
DKK3Q9UBP4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 SNORA1B-201ENST00000362535 133 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNU6-151P-201ENST00000364158 107 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.343-201ENST00000365354 112 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNU6-597P-201ENST00000365620 102 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.488-201ENST00000384403 102 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 SNORD116-25-201ENST00000516517 92 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 MIR378D2-201ENST00000580636 98 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC087685.1-201ENST00000587507 141 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC097639.2-201ENST00000603159 172 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC022217.4-201ENST00000604389 163 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 AP001485.1-201ENST00000604799 199 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 snoU13.31-201ENST00000607291 104 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.08□□□□□ -2.08
DKK3Q9UBP4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
DKK3Q9UBP4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
DKK3Q9UBP4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DKK3Q9UBP4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 SNORD113-1-201ENST00000365321 69 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
DKK3Q9UBP4 SNORA26-201ENST00000391286 122 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 SNRPGP10-201ENST00000432323 225 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 snoU13.18-201ENST00000459483 104 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 AC084364.2-201ENST00000546924 395 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 MIR548X2-201ENST00000579776 100 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 MIR4762-201ENST00000585261 75 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 AC132825.6-201ENST00000638861 357 ntBASIC2.07□□□□□ -2.08
DKK3Q9UBP4 AL157777.2-201ENST00000258070 137 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.568-201ENST00000384742 113 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 AL158823.1-201ENST00000418441 478 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 FTH1P12-201ENST00000432137 551 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 RNU7-149P-201ENST00000516739 59 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 RNU7-28P-201ENST00000516759 62 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 AL591926.4-201ENST00000616895 298 ntBASIC2.06□□□□□ -2.08
DKK3Q9UBP4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
DKK3Q9UBP4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DKK3Q9UBP4 RNY1P10-201ENST00000363268 113 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 RNU6-818P-201ENST00000364837 108 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 RNU6-81P-201ENST00000365608 104 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 MIR489-201ENST00000384923 84 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 MIR522-201ENST00000385071 87 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 MIR569-201ENST00000385228 96 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DKK3Q9UBP4 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 Pinc.1-201ENST00000616452 154 ntBASIC2.05□□□□□ -2.08
DKK3Q9UBP4 MIR126-201ENST00000362291 85 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 SNORA63D-201ENST00000364359 132 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU6-978P-201ENST00000364371 103 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 SNORA25.9-201ENST00000365087 128 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU4-11P-201ENST00000365287 132 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.521-201ENST00000384560 114 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU6-768P-201ENST00000384683 107 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
DKK3Q9UBP4 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU6-131P-201ENST00000391144 107 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AC245047.3-201ENST00000429428 127 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.04□□□□□ -2.08
DKK3Q9UBP4 RNU2-56P-201ENST00000516826 190 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.04□□□□□ -2.08
DKK3Q9UBP4 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AC008507.4-201ENST00000585464 127 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms